contig_metadata
24 rows where analysis = "blastn", bioproject = "PRJNA781196" and tax_phylum = "Oomycota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2035255 | 2035255 | PRJNA781196_P_NODE_34622_length_301_cov_1.368421_g34245_i0 | PRJNA781196 | 34622 | 301 | 1.368421 | 4.11894721 | Phytophthora nicotianae | 4792 | SAR_Eukaryotes | SAR_Eukaryotes | 255 | 1.99e-63 | NTclustered | gi|675172666|ref|XM_008896970.1| | 761204 | g34245 | i0 | 83.824 | 4.95681063122924 | 272 | 40 | 90 | 4 | 1 | 270 | 467 | 198 | Phytophthora parasitica INRA-310 ADP/ATP translocase 1 mRNA | blastn | 1492 | 255 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Peronosporales | Peronosporaceae | Phytophthora | Phytophthora nicotianae | ||
| 2035444 | 2035444 | PRJNA781196_P_NODE_46562_length_262_cov_1.650794_g46185_i0 | PRJNA781196 | 46562 | 262 | 1.650794 | 4.32508028 | Saprolegnia parasitica | 101203 | SAR_Eukaryotes | SAR_Eukaryotes | 300 | 7.73e-77 | NTclustered | gi|813177542|ref|XM_012349851.1| | 695850 | g46185 | i0 | 88.889 | 8.34732824427481 | 243 | 27 | 93 | 0 | 1 | 243 | 481 | 239 | Saprolegnia parasitica CBS 223.65 30S ribosomal protein S19e mRNA | blastn | 2187 | 300 | 1 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Saprolegniaceae | Saprolegnia | Saprolegnia parasitica | ||
| 2035521 | 2035521 | PRJNA781196_P_NODE_51102_length_252_cov_1.743017_g50725_i0 | PRJNA781196 | 51102 | 252 | 1.743017 | 4.39240284 | Pythium sp. AP | 378252 | SAR_Eukaryotes | SAR_Eukaryotes | 353 | 5.59e-93 | NTclustered | gi|90855438|dbj|AB254193.1| | 378252 | g50725 | i0 | 95.475 | 78.9285714285714 | 221 | 10 | 88 | 0 | 2 | 222 | 221 | 1 | Pythium sp. AP genes for 28S rRNA, IGS, 5S rRNA, partial and complete sequence, strain: AP-1, AP-2 and AP-3 | blastn | 19890 | 353 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Pythiales | Pythiaceae | Pythium | Pythium sp. AP | ||
| 2486889 | 2486889 | PRJNA781196_P_NODE_9982_length_506_cov_1.080831_g9606_i0 | PRJNA781196 | 9982 | 506 | 1.080831 | 5.46900486 | Phytophthora | 4783 | SAR_Eukaryotes | SAR_Eukaryotes | 597 | 5.069999999999999e-166 | NTclustered | gi|2795048588|ref|XM_067932045.1| | 4785 | g9606 | i0 | 88.016 | 70.9387351778656 | 509 | 55 | 100 | 5 | 1 | 506 | 677 | 172 | Phytophthora cinnamomi 40S ribosomal protein S6 (IUM83_07725), partial mRNA | blastn | 35895 | 597 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Peronosporales | Peronosporaceae | Phytophthora | Phytophthora cinnamomi | ||
| 3310357 | 3310357 | PRJNA781196_P_NODE_27283_length_333_cov_1.165385_g26906_i0 | PRJNA781196 | 27283 | 333 | 1.165385 | 3.88073205 | Saprolegnia diclina | 112098 | SAR_Eukaryotes | SAR_Eukaryotes | 411 | 4.489999999999999e-110 | NTclustered | gi|669145711|ref|XM_008610196.1| | 1156394 | g26906 | i0 | 88.791 | 96.9069069069069 | 339 | 32 | 100 | 2 | 1 | 333 | 139 | 477 | Saprolegnia diclina VS20 ubiquitin-40S ribosomal protein S27a mRNA | blastn | 32270 | 411 | 1 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Saprolegniaceae | Saprolegnia | Saprolegnia diclina | ||
| 5039580 | 5039580 | PRJNA781196_P_NODE_36444_length_294_cov_2.117647_g36067_i0 | PRJNA781196 | 36444 | 294 | 2.117647 | 6.22588218 | Saprolegnia | 4769 | SAR_Eukaryotes | SAR_Eukaryotes | 154 | 7.27e-33 | NTclustered | gi|813126177|ref|XM_012341554.1| | 695850 | g36067 | i0 | 83.051 | 2.31632653061224 | 177 | 22 | 59 | 8 | 11 | 183 | 159 | 331 | Saprolegnia parasitica CBS 223.65 hypothetical protein mRNA | blastn | 681 | 154 | 1 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Saprolegniaceae | Saprolegnia | Saprolegnia parasitica | ||
| 6315159 | 6315159 | PRJNA781196_P_NODE_17405_length_400_cov_1.483180_g17028_i0 | PRJNA781196 | 17405 | 400 | 1.48318 | 5.93272 | Phytophthora | 4783 | SAR_Eukaryotes | SAR_Eukaryotes | 435 | 3.2600000000000004e-117 | NTclustered | gi|2795047467|ref|XM_067937988.1| | 4785 | g17028 | i0 | 86.318 | 99.4525 | 402 | 51 | 100 | 4 | 1 | 400 | 88 | 487 | Phytophthora cinnamomi UPF0468 protein (IUM83_13323), partial mRNA | blastn | 39781 | 435 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Peronosporales | Peronosporaceae | Phytophthora | Phytophthora cinnamomi | ||
| 7137919 | 7137919 | PRJNA781196_P_NODE_37306_length_291_cov_1.903670_g36929_i0 | PRJNA781196 | 37306 | 291 | 1.90367 | 5.5396797 | Saprolegnia diclina | 112098 | SAR_Eukaryotes | SAR_Eukaryotes | 246 | 1.1499999999999999e-60 | NTclustered | gi|669146817|ref|XM_008610749.1| | 1156394 | g36929 | i0 | 83.582 | 5.78694158075601 | 268 | 39 | 91 | 5 | 26 | 291 | 45 | 309 | Saprolegnia diclina VS20 40S ribosomal protein S8 mRNA | blastn | 1684 | 246 | 1 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Saprolegniaceae | Saprolegnia | Saprolegnia diclina | ||
| 7589323 | 7589323 | PRJNA781196_P_NODE_47866_length_258_cov_1.686486_g47489_i0 | PRJNA781196 | 47866 | 258 | 1.686486 | 4.35113388 | Phytophthora | 4783 | SAR_Eukaryotes | SAR_Eukaryotes | 363 | 9.55e-96 | NTclustered | gi|38489929|gb|AY456093.1| | 4792 | g47489 | i0 | 92.188 | 96.9147286821705 | 256 | 20 | 99 | 0 | 3 | 258 | 826 | 1081 | Phytophthora nicotianae heat shock protein 70 (Hsp70a) gene, complete cds | blastn | 25004 | 363 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Peronosporales | Peronosporaceae | Phytophthora | Phytophthora nicotianae | ||
| 8412279 | 8412279 | PRJNA781196_P_NODE_28907_length_325_cov_1.238095_g28530_i0 | PRJNA781196 | 28907 | 325 | 1.238095 | 4.02380875 | Phytophthora sojae | 67593 | SAR_Eukaryotes | SAR_Eukaryotes | 339 | 2.09e-88 | NTclustered | gi|695381842|ref|XM_009518920.1| | 67593 | g28530 | i0 | 85.849 | 43.5876923076923 | 318 | 45 | 98 | 0 | 8 | 325 | 1 | 318 | Phytophthora sojae hypothetical protein partial mRNA | blastn | 14166 | 339 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Peronosporales | Peronosporaceae | Phytophthora | Phytophthora sojae | ||
| 9688177 | 9688177 | PRJNA781196_P_NODE_63528_length_244_cov_0.912281_g63151_i0 | PRJNA781196 | 63528 | 244 | 0.912281 | 2.22596564 | Phytophthora sojae | 67593 | SAR_Eukaryotes | SAR_Eukaryotes | 340 | 4.189999999999999e-89 | NTclustered | gi|695429123|ref|XM_009531818.1| | 67593 | g63151 | i0 | 91.803 | 146.754098360656 | 244 | 20 | 100 | 0 | 1 | 244 | 1160 | 917 | Phytophthora sojae mitochondrial translation elongation factor Tu mRNA | blastn | 35808 | 340 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Peronosporales | Peronosporaceae | Phytophthora | Phytophthora sojae | ||
| 13512998 | 13512998 | PRJNA781196_P_NODE_31411_length_314_cov_0.983402_g31034_i0 | PRJNA781196 | 31411 | 314 | 0.983402 | 3.08788228 | Phytophthora sojae | 67593 | SAR_Eukaryotes | SAR_Eukaryotes | 202 | 2.7599999999999996e-47 | NTclustered | gi|695446583|ref|XM_009536226.1| | 67593 | g31034 | i0 | 81.423 | 3.17834394904459 | 253 | 41 | 80 | 6 | 65 | 314 | 61 | 310 | Phytophthora sojae hypothetical protein partial mRNA | blastn | 998 | 202 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Peronosporales | Peronosporaceae | Phytophthora | Phytophthora sojae | ||
| 13513527 | 13513527 | PRJNA781196_P_NODE_62691_length_245_cov_0.906977_g62314_i0 | PRJNA781196 | 62691 | 245 | 0.906977 | 2.22209365 | Phytophthora nicotianae | 4792 | SAR_Eukaryotes | SAR_Eukaryotes | 52.8 | 0.022 | NTclustered | gi|675176454|ref|XM_008898864.1| | 761204 | g62314 | i0 | 100 | 0.228571428571429 | 28 | 0 | 11 | 0 | 113 | 140 | 3016 | 3043 | Phytophthora parasitica INRA-310 hypothetical protein mRNA | blastn | 56 | 52.8 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Peronosporales | Peronosporaceae | Phytophthora | Phytophthora nicotianae | ||
| 13965307 | 13965307 | PRJNA781196_P_NODE_61991_length_245_cov_0.906977_g61614_i0 | PRJNA781196 | 61991 | 245 | 0.906977 | 2.22209365 | Pythiaceae | 4782 | SAR_Eukaryotes | SAR_Eukaryotes | 453 | 5.1900000000000006e-123 | NTclustered | gi|944326305|gb|KP842869.1| | 114742 | g61614 | i0 | 100 | 98.869387755102 | 245 | 0 | 100 | 0 | 1 | 245 | 498 | 254 | Pythium insidiosum strain Eq-22 28S ribosomal RNA gene, partial sequence | blastn | 24223 | 453 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Pythiales | Pythiaceae | Pythium | Pythium insidiosum | ||
| 14788032 | 14788032 | PRJNA781196_P_NODE_48932_length_255_cov_1.686813_g48555_i0 | PRJNA781196 | 48932 | 255 | 1.686813 | 4.30137315 | Phytophthora cinnamomi | 4785 | SAR_Eukaryotes | SAR_Eukaryotes | 276 | 1.26e-69 | NTclustered | gi|2795023784|ref|XM_067929914.1| | 4785 | g48555 | i0 | 88.261 | 86.1529411764706 | 230 | 27 | 90 | 0 | 2 | 231 | 1466 | 1237 | Phytophthora cinnamomi hsp70-like protein (IUM83_05758), partial mRNA | blastn | 21969 | 276 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Peronosporales | Peronosporaceae | Phytophthora | Phytophthora cinnamomi | ||
| 17337894 | 17337894 | PRJNA781196_P_NODE_62534_length_245_cov_0.906977_g62157_i0 | PRJNA781196 | 62534 | 245 | 0.906977 | 2.22209365 | Aphanomyces invadans | 157072 | SAR_Eukaryotes | SAR_Eukaryotes | 243 | 1.22e-59 | NTclustered | gi|673047296|ref|XM_008879387.1| | 157072 | g62157 | i0 | 84.49 | 3.13061224489796 | 245 | 38 | 100 | 0 | 1 | 245 | 295 | 51 | Aphanomyces invadans 60S ribosomal protein mRNA | blastn | 767 | 243 | 1 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Verrucalvaceae | Aphanomyces | Aphanomyces invadans | ||
| 18610605 | 18610605 | PRJNA781196_P_NODE_17495_length_399_cov_1.435583_g17118_i0 | PRJNA781196 | 17495 | 399 | 1.435583 | 5.72797617 | Saprolegnia diclina | 112098 | SAR_Eukaryotes | SAR_Eukaryotes | 303 | 9.56e-78 | NTclustered | gi|669140539|ref|XM_008607616.1| | 1156394 | g17118 | i0 | 81.768 | 2.03007518796993 | 362 | 66 | 91 | 0 | 1 | 362 | 420 | 59 | Saprolegnia diclina VS20 50S ribosomal protein L14e mRNA | blastn | 810 | 303 | 1 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Saprolegniaceae | Saprolegnia | Saprolegnia diclina | ||
| 18610706 | 18610706 | PRJNA781196_P_NODE_24175_length_349_cov_1.536232_g23798_i0 | PRJNA781196 | 24175 | 349 | 1.536232 | 5.36144968 | Saprolegnia diclina | 112098 | SAR_Eukaryotes | SAR_Eukaryotes | 235 | 3.05e-57 | NTclustered | gi|669150047|ref|XM_008612364.1| | 1156394 | g23798 | i0 | 79.143 | 95.3868194842407 | 350 | 65 | 99 | 8 | 3 | 348 | 770 | 425 | Saprolegnia diclina VS20 hypothetical protein partial mRNA | blastn | 33290 | 235 | 1 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Saprolegniaceae | Saprolegnia | Saprolegnia diclina | ||
| 19885986 | 19885986 | PRJNA781196_P_NODE_27256_length_333_cov_1.200000_g26879_i0 | PRJNA781196 | 27256 | 333 | 1.2 | 3.996 | Phytophthora ramorum | 164328 | SAR_Eukaryotes | SAR_Eukaryotes | 276 | 1.71e-69 | NTclustered | gi|2794910602|ref|XM_067891142.1| | 164328 | g26879 | i0 | 85.556 | 6.56156156156156 | 270 | 32 | 80 | 6 | 66 | 333 | 50 | 314 | Phytophthora ramorum 60S ribosomal protein L7a-2 (KRP23_6008), partial mRNA | blastn | 2185 | 276 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Peronosporales | Peronosporaceae | Phytophthora | Phytophthora ramorum | ||
| 21161807 | 21161807 | PRJNA781196_P_NODE_31277_length_314_cov_1.618257_g30900_i0 | PRJNA781196 | 31277 | 314 | 1.618257 | 5.08132698 | Achlya klebsiana | 4767 | SAR_Eukaryotes | SAR_Eukaryotes | 231 | 3.52e-56 | NTclustered | gi|166301|gb|J05597.1|ACKBTUB | 4767 | g30900 | i0 | 80.255 | 85.6528662420382 | 314 | 56 | 99 | 6 | 3 | 313 | 962 | 652 | A.klebsiana beta-tubulin gene, complete cds | blastn | 26895 | 231 | 1 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Achlyaceae | Achlya | Achlya klebsiana | ||
| 21162101 | 21162101 | PRJNA781196_P_NODE_51617_length_252_cov_0.871508_g51240_i0 | PRJNA781196 | 51617 | 252 | 0.871508 | 2.19620016 | Phytophthora infestans | 4787 | SAR_Eukaryotes | SAR_Eukaryotes | 200 | 7.709999999999998e-47 | NTclustered | gi|301108026|ref|XM_002903049.1| | 403677 | g51240 | i0 | 84.848 | 6.90079365079365 | 198 | 30 | 79 | 0 | 50 | 247 | 294 | 97 | Phytophthora infestans T30-4 40S ribosomal protein S21 (PITG_09442), mRNA | blastn | 1739 | 200 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Peronosporales | Peronosporaceae | Phytophthora | Phytophthora infestans | ||
| 22436576 | 22436576 | PRJNA781196_P_NODE_34978_length_300_cov_1.030837_g34601_i0 | PRJNA781196 | 34978 | 300 | 1.030837 | 3.092511 | Phytophthora sojae | 67593 | SAR_Eukaryotes | SAR_Eukaryotes | 309 | 1.5e-79 | NTclustered | gi|695375632|ref|XM_009517294.1| | 67593 | g34601 | i0 | 85.714 | 6.40333333333333 | 294 | 40 | 98 | 2 | 6 | 298 | 604 | 312 | Phytophthora sojae hypothetical protein partial mRNA | blastn | 1921 | 309 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Peronosporales | Peronosporaceae | Phytophthora | Phytophthora sojae | ||
| 24985610 | 24985610 | PRJNA781196_P_NODE_27040_length_334_cov_1.195402_g26663_i0 | PRJNA781196 | 27040 | 334 | 1.195402 | 3.99264268 | Saprolegnia diclina | 112098 | SAR_Eukaryotes | SAR_Eukaryotes | 60.2 | 1.88e-4 | NTclustered | gi|669145043|ref|XM_008609862.1| | 1156394 | g26663 | i0 | 94.737 | 4.07784431137725 | 38 | 2 | 11 | 0 | 107 | 144 | 3567 | 3604 | Saprolegnia diclina VS20 hypothetical protein partial mRNA | blastn | 1362 | 60.2 | 1 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Saprolegniaceae | Saprolegnia | Saprolegnia diclina | ||
| 24985727 | 24985727 | PRJNA781196_P_NODE_34240_length_302_cov_3.668122_g33863_i0 | PRJNA781196 | 34240 | 302 | 3.668122 | 11.07772844 | Phytophthora ramorum | 164328 | SAR_Eukaryotes | SAR_Eukaryotes | 252 | 2.58e-62 | NTclustered | gi|2794921736|ref|XM_067881102.1| | 164328 | g33863 | i0 | 82.353 | 6.75496688741722 | 289 | 51 | 96 | 0 | 14 | 302 | 828 | 540 | Phytophthora ramorum Succinate--CoA ligase [ADP-forming] subunit alpha (KRP23_10630), partial mRNA | blastn | 2040 | 252 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Peronosporales | Peronosporaceae | Phytophthora | Phytophthora ramorum |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;