contig_metadata
5 rows where analysis = "blastn", bioproject = "PRJNA781196" and tax_phylum = "Myxococcota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 4587593 | 4587593 | PRJNA781196_P_NODE_40904_length_280_cov_1.483092_g40527_i0 | PRJNA781196 | 40904 | 280 | 1.483092 | 4.1526576 | Sandaracinus amylolyticus | 927083 | Bacteria | Bacteria | 315 | 2.98e-81 | NTclustered | gi|816953346|gb|CP011125.1| | 927083 | g40527 | i0 | 87.41 | 219.760714285714 | 278 | 29 | 98 | 6 | 1 | 274 | 8615639 | 8615914 | Sandaracinus amylolyticus strain DSM 53668, complete genome | blastn | 61533 | 315 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Sandaracinaceae | Sandaracinus | Sandaracinus amylolyticus | |||
| 13513654 | 13513654 | PRJNA781196_P_NODE_9351_length_521_cov_0.962054_g8976_i0 | PRJNA781196 | 9351 | 521 | 0.962054 | 5.01230134 | Myxococcus stipitatus | 83455 | Bacteria | Bacteria | 407 | 9.46e-109 | NTclustered | gi|2700865302|gb|CP147913.1| | 83455 | g8976 | i0 | 81.8 | 89.2130518234165 | 489 | 85 | 93 | 4 | 16 | 502 | 10163865 | 10164351 | Myxococcus stipitatus strain KYC2006 chromosome, complete genome | blastn | 46480 | 407 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcaceae | Myxococcus | Myxococcus stipitatus | ||
| 14787672 | 14787672 | PRJNA781196_P_NODE_22052_length_363_cov_1.344828_g21675_i0 | PRJNA781196 | 22052 | 363 | 1.344828 | 4.88172564 | Archangium violaceum | 83451 | Bacteria | Bacteria | 270 | 8.73e-68 | NTclustered | gi|1985695619|gb|CP069396.1| | 83451 | g21675 | i0 | 80.501 | 103.396694214876 | 359 | 64 | 98 | 4 | 4 | 359 | 4318312 | 4317957 | Archangium violaceum strain SDU8 chromosome, complete genome | blastn | 37533 | 270 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Archangiaceae | Archangium | Archangium violaceum | ||
| 15239793 | 15239793 | PRJNA781196_P_NODE_56832_length_249_cov_0.886364_g56455_i0 | PRJNA781196 | 56832 | 249 | 0.886364 | 2.20704636 | Polyangiales | 3031712 | Bacteria | Bacteria | 353 | 5.52e-93 | NTclustered | gi|161158851|emb|AM746676.1| | 448385 | g56455 | i0 | 92.4 | 197.236947791165 | 250 | 16 | 100 | 3 | 1 | 249 | 3490069 | 3489822 | Sorangium cellulosum 'So ce 56' complete genome | blastn | 49112 | 353 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Sorangium | Sorangium cellulosum | |||
| 23712295 | 23712295 | PRJNA781196_P_NODE_49339_length_254_cov_1.436464_g48962_i0 | PRJNA781196 | 49339 | 254 | 1.436464 | 3.64861856 | Archangium violaceum | 83451 | Bacteria | Bacteria | 368 | 2.02e-97 | NTclustered | gi|1985695619|gb|CP069396.1| | 83451 | g48962 | i0 | 92.913 | 228.834645669291 | 254 | 17 | 99 | 1 | 1 | 253 | 587298 | 587045 | Archangium violaceum strain SDU8 chromosome, complete genome | blastn | 58124 | 368 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Archangiaceae | Archangium | Archangium violaceum |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;