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contig_metadata

11 rows where analysis = "blastn", bioproject = "PRJNA781196" and tax_phylum = "Discosea"

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tax_superkingdom 1

tax_phylum 1

  • Discosea · 11 ✖

tax_clade 1

bioproject 1

  • PRJNA781196 · 11 ✖

analysis 1

  • blastn · 11 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
759227 759227 PRJNA781196_P_NODE_35761_length_297_cov_1.174107_g35384_i0 PRJNA781196 35761 297 1.174107 3.48709779 Vannella sp. strain W181G/I 325084 Discosea other_Eukaryota 532 8.08e-147   NTclustered gi|62865938|gb|AY929913.1| 325084 g35384 i0 98.99 101.026936026936 297 3 100 0 1 297 742 1038 Vannella sp. strain W181G/I 18S small subunit ribosomal RNA gene, partial sequence blastn 30005 532 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella sp. strain W181G/I
7137942 7137942 PRJNA781196_P_NODE_38706_length_287_cov_1.364486_g38329_i0 PRJNA781196 38706 287 1.364486 3.91607482 Vannella sp. 1973054 Discosea other_Eukaryota 473 4.78e-129   NTclustered gi|2806326588|gb|PQ345838.1| 1973054 g38329 i0 96.516 95.9337979094077 287 9 100 1 1 287 443 158 Vannella sp. isolate 346_1c small subunit ribosomal RNA gene, partial sequence blastn 27533 473 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella sp.
7138171 7138171 PRJNA781196_P_NODE_52406_length_252_cov_0.871508_g52029_i0 PRJNA781196 52406 252 0.871508 2.19620016 Paramoeba branchiphila 308475 Discosea other_Eukaryota 152 2.19e-32   NTclustered gi|226347442|gb|FJ807261.1| 308475 g52029 i0 92.453 39.7976190476191 106 8 42 0 147 252 306 201 Neoparamoeba branchiphila strain AMOP1 elongation factor 1 alpha gene, partial cds blastn 10029 152 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Paramoebidae Paramoeba Paramoeba branchiphila
8864473 8864473 PRJNA781196_P_NODE_5247_length_672_cov_3.205342_g4884_i0 PRJNA781196 5247 672 3.205342 21.53989824 Vannella 95228 Discosea other_Eukaryota 1138 0   NTclustered gi|861554667|gb|KP719197.1| 197532 g4884 i0 97.024 80.2083333333333 672 20 100 0 1 672 632 1303 Vannella simplex strain A17WVB small subunit ribosomal RNA gene, partial sequence blastn 53900 1140 0.998245614035088 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella simplex
12238715 12238715 PRJNA781196_P_NODE_22310_length_361_cov_1.500000_g21933_i0 PRJNA781196 22310 361 1.5 5.415 Cochliopodium minus 313997 Discosea other_Eukaryota 630 3.459999999999999e-176   NTclustered gi|330902862|gb|JF298257.1| 313997 g21933 i0 98.082 74.398891966759 365 2 100 3 1 361 806 1169 Cochliopodium minus 18S ribosomal RNA gene, partial sequence blastn 26858 630 1 Eukaryota Amoebozoa   Discosea   Himatismenida Cochliopodiidae Cochliopodium Cochliopodium minus
14788026 14788026 PRJNA781196_P_NODE_48492_length_256_cov_3.836066_g48115_i0 PRJNA781196 48492 256 3.836066 9.82032896 Vannella ebro 207334 Discosea other_Eukaryota 361 3.4e-95   NTclustered gi|33946344|gb|AY294151.1| 207334 g48115 i0 92.157 95.6171875 255 20 99 0 2 256 13 267 Vannella ebro actin mRNA, complete cds blastn 24478 361 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella ebro
14788365 14788365 PRJNA781196_P_NODE_68332_length_205_cov_4.196970_g67955_i0 PRJNA781196 68332 205 4.19697 8.6037885 Vannella simplex 197532 Discosea other_Eukaryota 379 7.229999999999999e-101   NTclustered gi|284192609|gb|GQ265407.1| 197532 g67955 i0 100 100.190243902439 205 0 100 0 1 205 472 676 Vannella simplex strain L4A Cl 4/1/2 clone A147.4 18S ribosomal RNA gene, partial sequence blastn 20539 379 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella simplex
14788399 14788399 PRJNA781196_P_NODE_992_length_1355_cov_7.443058_g841_i0 PRJNA781196 992 1355 7.443058 100.8534359 Paramoeba branchiphila 308475 Discosea other_Eukaryota 809 0   NTclustered gi|226347442|gb|FJ807261.1| 308475 g841 i0 78.886 69.5372693726937 1203 246 88 7 45 1243 2 1200 Neoparamoeba branchiphila strain AMOP1 elongation factor 1 alpha gene, partial cds blastn 94223 809 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Paramoebidae Paramoeba Paramoeba branchiphila
21161726 21161726 PRJNA781196_P_NODE_25757_length_340_cov_2.842697_g25380_i0 PRJNA781196 25757 340 2.842697 9.6651698 Platyamoeba placida 3454475 Discosea other_Eukaryota 466 9.68e-127   NTclustered gi|33946348|gb|AY294153.1| 197527 g25380 i0 91.892 96.4470588235294 333 27 98 0 1 333 698 1030 Platyamoeba placida actin mRNA, partial cds blastn 32792 466 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Platyamoeba Platyamoeba placida
23712626 23712626 PRJNA781196_P_NODE_8259_length_549_cov_1.363445_g7884_i0 PRJNA781196 8259 549 1.363445 7.48531305 Vannella sp. strain CAZ6/I 325077 Discosea other_Eukaryota 856 0   NTclustered gi|62865939|gb|AY929914.1| 325077 g7884 i0 94.746 102.326047358834 552 25 100 4 1 549 12 562 Vannella sp. strain CAZ6/I 18S small subunit ribosomal RNA gene, partial sequence blastn 56177 856 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella sp. strain CAZ6/I
25437971 25437971 PRJNA781196_P_NODE_25800_length_340_cov_1.745318_g25423_i0 PRJNA781196 25800 340 1.745318 5.9340812 Vannella 95228 Discosea other_Eukaryota 606 5.469999999999998e-169   NTclustered gi|399764213|gb|JQ271724.1| 1215628 g25423 i0 98.824 89.2941176470588 340 4 100 0 1 340 1894 1555 Vannella sp. ACN1 18S ribosomal RNA gene, partial sequence blastn 30360 608 0.996710526315789 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella sp. ACN1

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;