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contig_metadata

8 rows where analysis = "blastn", bioproject = "PRJNA781196" and tax_phylum = "Apicomplexa"

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tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 8 ✖

tax_clade 1

bioproject 1

  • PRJNA781196 · 8 ✖

analysis 1

  • blastn · 8 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
759117 759117 PRJNA781196_P_NODE_28201_length_328_cov_1.835294_g27824_i0 PRJNA781196 28201 328 1.835294 6.01976432 Plasmodium gaboni 647221 SAR_Eukaryotes SAR_Eukaryotes 56.5 0.002   NTclustered gi|1084939551|ref|XM_018788273.1| 647221 g27824 i0 100 5.76524390243902 30 0 9 0 252 281 778 749 Plasmodium gaboni hypothetical protein partial mRNA blastn 1891 56.5 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium gaboni
2035394 2035394 PRJNA781196_P_NODE_43482_length_272_cov_1.000000_g43105_i0 PRJNA781196 43482 272 1 2.72 Plasmodium gallinaceum 5849 SAR_Eukaryotes SAR_Eukaryotes 69.4 2.48e-7   NTclustered gi|1620130862|ref|XM_028673722.1| 5849 g43105 i0 93.617 0.408088235294118 47 1 17 2 54 99 1383 1428 Plasmodium gallinaceum RNA polymerase II-associated protein 1, putative (PGAL8A_00492300), partial mRNA blastn 111 69.4 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium gallinaceum
4587160 4587160 PRJNA781196_P_NODE_11944_length_469_cov_3.537879_g11568_i0 PRJNA781196 11944 469 3.537879 16.59265251 Cryptosporidium parvum 5807 SAR_Eukaryotes SAR_Eukaryotes 209 2.56e-49   NTclustered gi|66359883|ref|XM_627120.1| 353152 g11568 i0 78.997 6.35820895522388 319 57 67 10 54 367 380 67 Cryptosporidium parvum Iowa II histone H2A (cgd8_2170) mRNA, complete cds blastn 2982 209 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Cryptosporidiidae Cryptosporidium Cryptosporidium parvum
12239270 12239270 PRJNA781196_P_NODE_58010_length_248_cov_0.891429_g57633_i0 PRJNA781196 58010 248 0.891429 2.21074392 Eimeria maxima 5804 SAR_Eukaryotes SAR_Eukaryotes 56.5 0.002   NTclustered gi|915128576|ref|XM_013479404.1| 5804 g57633 i0 100 0.362903225806452 30 0 12 0 95 124 2618 2589 Eimeria maxima RNA-binding protein, putative partial mRNA blastn 90 56.5 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria maxima
14788355 14788355 PRJNA781196_P_NODE_67372_length_242_cov_0.893491_g66995_i0 PRJNA781196 67372 242 0.893491 2.16224822 Plasmodium berghei 5821 SAR_Eukaryotes SAR_Eukaryotes 350 6.9e-92   NTclustered gi|1843573164|ref|XM_034566431.1| 5823 g66995 i0 99.479 3.96694214876033 192 1 79 0 3 194 195 4 Plasmodium berghei ANKA U6 snRNA-associated Sm-like protein LSm2, putative (PBANKA_1235100), partial mRNA blastn 960 350 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium berghei
23711819 23711819 PRJNA781196_P_NODE_14579_length_430_cov_2.532213_g14202_i0 PRJNA781196 14579 430 2.532213 10.8885159 Neospora caninum 29176 SAR_Eukaryotes SAR_Eukaryotes 241 8.25e-59   NTclustered gi|401402052|ref|XM_003881109.1| 572307 g14202 i0 78.307 63.2116279069767 378 78 87 4 1 376 3 378 Neospora caninum Liverpool putative ubiquitin / ribosomal protein CEP52 fusion protein (NCLIV_042000), partial mRNA blastn 27181 241 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Neospora Neospora caninum
23712152 23712152 PRJNA781196_P_NODE_39419_length_285_cov_1.103774_g39042_i0 PRJNA781196 39419 285 1.103774 3.1457559 Plasmodium mackerrasae 2138133 SAR_Eukaryotes SAR_Eukaryotes 169 2.5099999999999996e-37   NTclustered gi|1372150144|gb|MF508315.1| 2138133 g39042 i0 84.94 3.33684210526316 166 25 58 0 78 243 1 166 Plasmodium mackerrasae isolate 1-26-11 putative 26S proteasome regulatory subunit 7 gene, partial cds blastn 951 169 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium mackerrasae
24163059 24163059 PRJNA781196_P_NODE_64819_length_243_cov_0.917647_g64442_i0 PRJNA781196 64819 243 0.917647 2.22988221 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 58.4 4.71e-4   NTclustered gi|915009362|ref|XM_013395395.1| 5801 g64442 i0 100 7.51851851851852 31 0 13 0 98 128 130 100 Eimeria acervulina hypothetical protein, conserved partial mRNA blastn 1827 58.4 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria acervulina

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;