RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA781196" and tax_clade = "Metamonada"

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tax_phylum 2

tax_superkingdom 1

tax_clade 1

  • Metamonada · 3 ✖

bioproject 1

  • PRJNA781196 · 3 ✖

analysis 1

  • blastn · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
14787727 14787727 PRJNA781196_P_NODE_25592_length_341_cov_2.608209_g25215_i0 PRJNA781196 25592 341 2.608209 8.89399269 Histomonas meleagridis 135588 Parabasalia other_Eukaryota 191 6.54e-44   NTclustered gi|2794863061|ref|XM_067914594.1| 135588 g25215 i0 82.353 27.7507331378299 221 37 65 2 97 316 420 201 Histomonas meleagridis peptidyl-prolyl cis-trans isomerase (GO595_001760), partial mRNA blastn 9463 191 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Dientamoebidae Histomonas Histomonas meleagridis
18611046 18611046 PRJNA781196_P_NODE_47955_length_258_cov_1.324324_g47578_i0 PRJNA781196 47955 258 1.324324 3.41675592 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 52.8 0.023   NTclustered gi|2806480732|ref|XM_068495128.1| 1144522 g47578 i0 100 0.108527131782946 28 0 11 0 18 45 305 278 Tritrichomonas foetus uncharacterized protein (TRFO_09894), partial mRNA blastn 28 52.8 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
23712554 23712554 PRJNA781196_P_NODE_65519_length_243_cov_0.917647_g65142_i0 PRJNA781196 65519 243 0.917647 2.22988221 Monocercomonoides exilis 2049356 Preaxostyla other_Eukaryota 58.4 4.71e-4   NTclustered gi|2794954329|ref|XM_067876013.1| 2049356 g65142 i0 97.143 0.1440329218107 35 0 14 1 155 189 8639 8672 Monocercomonoides exilis putative leucine rich repeat protein (MONOS_5831), partial mRNA blastn 35 58.4 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides exilis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;