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contig_metadata

33 rows where analysis = "blastn", bioproject = "PRJNA781196" and tax_clade = "Amoebozoa"

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tax_phylum 3

tax_superkingdom 1

tax_clade 1

  • Amoebozoa · 33 ✖

bioproject 1

  • PRJNA781196 · 33 ✖

analysis 1

  • blastn · 33 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
759227 759227 PRJNA781196_P_NODE_35761_length_297_cov_1.174107_g35384_i0 PRJNA781196 35761 297 1.174107 3.48709779 Vannella sp. strain W181G/I 325084 Discosea other_Eukaryota 532 8.08e-147   NTclustered gi|62865938|gb|AY929913.1| 325084 g35384 i0 98.99 101.026936026936 297 3 100 0 1 297 742 1038 Vannella sp. strain W181G/I 18S small subunit ribosomal RNA gene, partial sequence blastn 30005 532 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella sp. strain W181G/I
759286 759286 PRJNA781196_P_NODE_40081_length_283_cov_1.100000_g39704_i0 PRJNA781196 40081 283 1.1 3.113 Dictyostelium discoideum 44689 Evosea other_Eukaryota 180 1.15e-40   NTclustered gi|268638122|ref|XM_638368.2| 352472 g39704 i0 79.104 10.6961130742049 268 50 94 4 14 279 404 141 Dictyostelium discoideum AX4 ubiquitin-conjugating enzyme E2 (rad6) mRNA, complete cds blastn 3027 180 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
1211190 1211190 PRJNA781196_P_NODE_27841_length_330_cov_1.214008_g27464_i0 PRJNA781196 27841 330 1.214008 4.0062264 Dictyostelium 5782 Evosea other_Eukaryota 217 1.04e-51   NTclustered gi|2274919|emb|AJ000063.1| 44689 g27464 i0 82.213 48.7848484848485 253 44 77 1 27 279 359 108 Dictyostelium discoideum mRNA for ADP-ribosylation factor 1 blastn 16099 217 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
7137783 7137783 PRJNA781196_P_NODE_28346_length_328_cov_0.917647_g27969_i0 PRJNA781196 28346 328 0.917647 3.00988216 Dictyostelium discoideum 44689 Evosea other_Eukaryota 244 4.7399999999999996e-60   NTclustered gi|66800824|ref|XM_629336.1| 352472 g27969 i0 84.553 5.70121951219512 246 38 75 0 49 294 246 1 Dictyostelium discoideum AX4 Ras GTPase (rasD) mRNA, complete cds blastn 1870 244 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
7137839 7137839 PRJNA781196_P_NODE_31846_length_312_cov_1.305439_g31469_i0 PRJNA781196 31846 312 1.305439 4.07296968 Dictyostelium purpureum 5786 Evosea other_Eukaryota 198 3.54e-46   NTclustered gi|330818907|ref|XM_003291484.1| 5786 g31469 i0 78.526 15.875 312 60 99 5 4 312 102 409 Dictyostelium purpureum ribosomal protein L10E (DICPUDRAFT_92700), mRNA blastn 4953 198 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
7137942 7137942 PRJNA781196_P_NODE_38706_length_287_cov_1.364486_g38329_i0 PRJNA781196 38706 287 1.364486 3.91607482 Vannella sp. 1973054 Discosea other_Eukaryota 473 4.78e-129   NTclustered gi|2806326588|gb|PQ345838.1| 1973054 g38329 i0 96.516 95.9337979094077 287 9 100 1 1 287 443 158 Vannella sp. isolate 346_1c small subunit ribosomal RNA gene, partial sequence blastn 27533 473 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella sp.
7138171 7138171 PRJNA781196_P_NODE_52406_length_252_cov_0.871508_g52029_i0 PRJNA781196 52406 252 0.871508 2.19620016 Paramoeba branchiphila 308475 Discosea other_Eukaryota 152 2.19e-32   NTclustered gi|226347442|gb|FJ807261.1| 308475 g52029 i0 92.453 39.7976190476191 106 8 42 0 147 252 306 201 Neoparamoeba branchiphila strain AMOP1 elongation factor 1 alpha gene, partial cds blastn 10029 152 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Paramoebidae Paramoeba Paramoeba branchiphila
7589338 7589338 PRJNA781196_P_NODE_52046_length_252_cov_0.871508_g51669_i0 PRJNA781196 52046 252 0.871508 2.19620016 Dictyosteliaceae 2058185 Evosea other_Eukaryota 158 4.71e-34   NTclustered gi|1057487858|gb|KX539489.1| 142831 g51669 i0 83.735 10.0396825396825 166 27 66 0 41 206 2857 2692 Dictyostelium polycephalum oxoglutarate dehydrogenase (ogdh) gene, complete cds blastn 2530 158 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales   Coremiostelium Coremiostelium polycephalum
8412346 8412346 PRJNA781196_P_NODE_33807_length_304_cov_1.471861_g33430_i0 PRJNA781196 33807 304 1.471861 4.47445744 Dictyostelium discoideum 44689 Evosea other_Eukaryota 187 7.44e-43   NTclustered gi|66826022|ref|XM_641274.1| 352472 g33430 i0 87.975 5.60855263157895 158 19 52 0 40 197 43 200 Dictyostelium discoideum AX4 S60 ribosomal protein L36a (rpl36a) mRNA, complete cds blastn 1705 187 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
8864473 8864473 PRJNA781196_P_NODE_5247_length_672_cov_3.205342_g4884_i0 PRJNA781196 5247 672 3.205342 21.53989824 Vannella 95228 Discosea other_Eukaryota 1138 0   NTclustered gi|861554667|gb|KP719197.1| 197532 g4884 i0 97.024 80.2083333333333 672 20 100 0 1 672 632 1303 Vannella simplex strain A17WVB small subunit ribosomal RNA gene, partial sequence blastn 53900 1140 0.998245614035088 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella simplex
9687689 9687689 PRJNA781196_P_NODE_32908_length_308_cov_1.131915_g32531_i0 PRJNA781196 32908 308 1.131915 3.4862982 Amoeba proteus 5775 Tubulinea other_Eukaryota 289 2.0099999999999996e-73   NTclustered gi|844573744|gb|KP411223.1| 5775 g32531 i0 83.654 1.01298701298701 312 46 100 3 1 308 343 33 Amoeba proteus Tom40 mRNA, complete cds blastn 312 289 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Amoebidae Amoeba Amoeba proteus
10963199 10963199 PRJNA781196_P_NODE_25249_length_343_cov_2.559259_g24872_i0 PRJNA781196 25249 343 2.559259 8.77825837 Cavenderia fasciculata 261658 Evosea other_Eukaryota 228 5.0199999999999985e-55   NTclustered gi|470252539|ref|XM_004359310.1| 261658 g24872 i0 78.932 38.4110787172012 337 69 98 2 7 342 516 181 Cavenderia fasciculata ADP-ribosylation factor (arfA), partial mRNA blastn 13175 228 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Cavenderiaceae Cavenderia Cavenderia fasciculata
11415073 11415073 PRJNA781196_P_NODE_18389_length_390_cov_3.558360_g18012_i0 PRJNA781196 18389 390 3.55836 13.877604 Dictyostelium 5782 Evosea other_Eukaryota 254 9.52e-63   NTclustered gi|167938|gb|M23749.1|DDIUBIQB 44689 g18012 i0 79.112 154.102564102564 383 69 97 9 12 390 11 386 D.discoideum ubiquitin mRNA, complete cds, clone DCUBV45 blastn 60100 254 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
11415300 11415300 PRJNA781196_P_NODE_65449_length_243_cov_0.917647_g65072_i0 PRJNA781196 65449 243 0.917647 2.22988221 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 215 2.64e-51   NTclustered gi|330802353|ref|XM_003289135.1| 5786 g65072 i0 84.722 22.8477366255144 216 31 89 2 7 222 264 51 Dictyostelium purpureum uncharacterized protein (DICPUDRAFT_88388), partial mRNA blastn 5552 215 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
12238715 12238715 PRJNA781196_P_NODE_22310_length_361_cov_1.500000_g21933_i0 PRJNA781196 22310 361 1.5 5.415 Cochliopodium minus 313997 Discosea other_Eukaryota 630 3.459999999999999e-176   NTclustered gi|330902862|gb|JF298257.1| 313997 g21933 i0 98.082 74.398891966759 365 2 100 3 1 361 806 1169 Cochliopodium minus 18S ribosomal RNA gene, partial sequence blastn 26858 630 1 Eukaryota Amoebozoa   Discosea   Himatismenida Cochliopodiidae Cochliopodium Cochliopodium minus
12239410 12239410 PRJNA781196_P_NODE_66810_length_242_cov_0.923077_g66433_i0 PRJNA781196 66810 242 0.923077 2.23384634 Amoeba proteus 5775 Tubulinea other_Eukaryota 257 4.3e-64   NTclustered gi|844573744|gb|KP411223.1| 5775 g66433 i0 85.892 0.995867768595041 241 34 99 0 2 242 790 550 Amoeba proteus Tom40 mRNA, complete cds blastn 241 257 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Amoebidae Amoeba Amoeba proteus
14788026 14788026 PRJNA781196_P_NODE_48492_length_256_cov_3.836066_g48115_i0 PRJNA781196 48492 256 3.836066 9.82032896 Vannella ebro 207334 Discosea other_Eukaryota 361 3.4e-95   NTclustered gi|33946344|gb|AY294151.1| 207334 g48115 i0 92.157 95.6171875 255 20 99 0 2 256 13 267 Vannella ebro actin mRNA, complete cds blastn 24478 361 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella ebro
14788343 14788343 PRJNA781196_P_NODE_6672_length_603_cov_3.220755_g6298_i0 PRJNA781196 6672 603 3.220755 19.42115265 uncultured Amoebozoa 590481 Root_unresolved Root_unresolved 1081 0   NTclustered gi|507138087|gb|KC583131.1| 590481 g6298 i0 99.005 80.3200663349917 603 6 100 0 1 603 145 747 Uncultured Amoebozoa clone RS.01f.10m.23 18S ribosomal RNA gene, partial sequence blastn 48433 1081 1 Eukaryota Amoebozoa             uncultured Amoebozoa
14788365 14788365 PRJNA781196_P_NODE_68332_length_205_cov_4.196970_g67955_i0 PRJNA781196 68332 205 4.19697 8.6037885 Vannella simplex 197532 Discosea other_Eukaryota 379 7.229999999999999e-101   NTclustered gi|284192609|gb|GQ265407.1| 197532 g67955 i0 100 100.190243902439 205 0 100 0 1 205 472 676 Vannella simplex strain L4A Cl 4/1/2 clone A147.4 18S ribosomal RNA gene, partial sequence blastn 20539 379 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella simplex
14788399 14788399 PRJNA781196_P_NODE_992_length_1355_cov_7.443058_g841_i0 PRJNA781196 992 1355 7.443058 100.8534359 Paramoeba branchiphila 308475 Discosea other_Eukaryota 809 0   NTclustered gi|226347442|gb|FJ807261.1| 308475 g841 i0 78.886 69.5372693726937 1203 246 88 7 45 1243 2 1200 Neoparamoeba branchiphila strain AMOP1 elongation factor 1 alpha gene, partial cds blastn 94223 809 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Paramoebidae Paramoeba Paramoeba branchiphila
19886546 19886546 PRJNA781196_P_NODE_63876_length_244_cov_0.912281_g63499_i0 PRJNA781196 63876 244 0.912281 2.22596564 Vermamoeba vermiformis 5778 Tubulinea other_Eukaryota 418 1.8799999999999994e-112   NTclustered gi|300078496|gb|GU001158.1| 5778 g63499 i0 97.551 25.094262295082 245 4 100 2 1 244 4131 4374 Hartmannella vermiformis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 6123 418 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis
19886556 19886556 PRJNA781196_P_NODE_64576_length_243_cov_1.376471_g64199_i0 PRJNA781196 64576 243 1.376471 3.34482453 Dictyostelium purpureum 5786 Evosea other_Eukaryota 145 3.51e-30   NTclustered gi|330801204|ref|XM_003288572.1| 5786 g64199 i0 85.517 4.20987654320988 145 14 58 6 18 158 393 534 Dictyostelium purpureum uncharacterized protein (DICPUDRAFT_92126), mRNA blastn 1023 145 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
21161599 21161599 PRJNA781196_P_NODE_16997_length_404_cov_0.930514_g16620_i0 PRJNA781196 16997 404 0.930514 3.75927656 Vermamoeba vermiformis 5778 Tubulinea other_Eukaryota 708 0   NTclustered gi|300078496|gb|GU001158.1| 5778 g16620 i0 98.267 62.3737623762376 404 7 100 0 1 404 2267 2670 Hartmannella vermiformis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 25199 708 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis
21161726 21161726 PRJNA781196_P_NODE_25757_length_340_cov_2.842697_g25380_i0 PRJNA781196 25757 340 2.842697 9.6651698 Platyamoeba placida 3454475 Discosea other_Eukaryota 466 9.68e-127   NTclustered gi|33946348|gb|AY294153.1| 197527 g25380 i0 91.892 96.4470588235294 333 27 98 0 1 333 698 1030 Platyamoeba placida actin mRNA, partial cds blastn 32792 466 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Platyamoeba Platyamoeba placida
21613473 21613473 PRJNA781196_P_NODE_49077_length_255_cov_1.285714_g48700_i0 PRJNA781196 49077 255 1.285714 3.2785707 Dictyostelium 5782 Evosea other_Eukaryota 322 1.6e-83   NTclustered gi|167579|gb|M14146.1|DDIACT15 44689 g48700 i0 89.412 99.3254901960784 255 27 100 0 1 255 1006 752 D.discoideum actin 15 gene, complete cds blastn 25328 322 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
22436694 22436694 PRJNA781196_P_NODE_44198_length_269_cov_1.591837_g43821_i0 PRJNA781196 44198 269 1.591837 4.28204153 Amoeba proteus 5775 Tubulinea other_Eukaryota 278 3.73e-70   NTclustered gi|844573744|gb|KP411223.1| 5775 g43821 i0 85.393 0.992565055762082 267 39 99 0 1 267 601 335 Amoeba proteus Tom40 mRNA, complete cds blastn 267 278 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Amoebidae Amoeba Amoeba proteus
22888769 22888769 PRJNA781196_P_NODE_1238_length_1245_cov_26.602389_g1057_i0 PRJNA781196 1238 1245 26.602389 331.19974305 Entamoeba 5758 Evosea other_Eukaryota 872 0   NTclustered gi|511083902|dbj|AK419160.1| 5759 g1057 i0 80.961 90.2570281124498 1124 194 89 18 49 1162 1142 29 Entamoeba histolytica cDNA clone: Xeh-003B20, actin, complete cds, strain: HM-1:IMSS blastn 112370 872 1 Eukaryota Amoebozoa   Evosea   Mastigamoebida Entamoebidae Entamoeba Entamoeba histolytica
23711784 23711784 PRJNA781196_P_NODE_1239_length_1245_cov_18.176621_g1058_i0 PRJNA781196 1239 1245 18.176621 226.29893145 Dictyostelium purpureum 5786 Evosea other_Eukaryota 928 0   NTclustered gi|330791385|ref|XM_003283726.1| 5786 g1058 i0 81.705 89.481124497992 1126 194 90 12 48 1167 1135 16 Dictyostelium purpureum uncharacterized protein (DICPUDRAFT_91170), partial mRNA blastn 111404 928 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
23712596 23712596 PRJNA781196_P_NODE_68339_length_204_cov_4.580153_g67962_i0 PRJNA781196 68339 204 4.580153 9.34351212 Acytostelium subglobosum 361139 Evosea other_Eukaryota 134 6.1800000000000006e-27   NTclustered gi|831754677|ref|XM_012892735.1| 1410327 g67962 i0 83.562 2.09803921568627 146 20 71 2 1 144 318 175 Acytostelium subglobosum LB1 hypothetical protein partial mRNA blastn 428 134 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Acytostelium Acytostelium subglobosum
23712626 23712626 PRJNA781196_P_NODE_8259_length_549_cov_1.363445_g7884_i0 PRJNA781196 8259 549 1.363445 7.48531305 Vannella sp. strain CAZ6/I 325077 Discosea other_Eukaryota 856 0   NTclustered gi|62865939|gb|AY929914.1| 325077 g7884 i0 94.746 102.326047358834 552 25 100 4 1 549 12 562 Vannella sp. strain CAZ6/I 18S small subunit ribosomal RNA gene, partial sequence blastn 56177 856 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella sp. strain CAZ6/I
24162863 24162863 PRJNA781196_P_NODE_2899_length_876_cov_3.349938_g2598_i0 PRJNA781196 2899 876 3.349938 29.34545688 Entamoeba 5758 Evosea other_Eukaryota 523 1.5599999999999996e-143   NTclustered gi|511085920|dbj|AK420211.1| 5759 g2598 i0 78.173 57.1038812785388 843 168 96 14 4 841 847 16 Entamoeba histolytica cDNA clone: Xeh-007N07, elongation factor 1-alpha 1, complete cds, strain: HM-1:IMSS blastn 50023 523 1 Eukaryota Amoebozoa   Evosea   Mastigamoebida Entamoebidae Entamoeba Entamoeba histolytica
24163034 24163034 PRJNA781196_P_NODE_59659_length_247_cov_0.896552_g59282_i0 PRJNA781196 59659 247 0.896552 2.21448344 Hartmannellidae 5776 Tubulinea other_Eukaryota 412 8.89e-111   NTclustered gi|399764208|gb|JQ271719.1| 1215625 g59282 i0 96.761 40.7651821862348 247 8 100 0 1 247 203 449 Saccamoeba sp. PV67 18S ribosomal RNA gene, partial sequence blastn 10069 412 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Hartmannellidae Saccamoeba Saccamoeba sp. PV67
25437971 25437971 PRJNA781196_P_NODE_25800_length_340_cov_1.745318_g25423_i0 PRJNA781196 25800 340 1.745318 5.9340812 Vannella 95228 Discosea other_Eukaryota 606 5.469999999999998e-169   NTclustered gi|399764213|gb|JQ271724.1| 1215628 g25423 i0 98.824 89.2941176470588 340 4 100 0 1 340 1894 1555 Vannella sp. ACN1 18S ribosomal RNA gene, partial sequence blastn 30360 608 0.996710526315789 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella sp. ACN1

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;