RNAquarium Metadata Server
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contig_metadata

7 rows where analysis = "blastn", bioproject = "PRJNA774958" and tax_clade = "Discoba"

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tax_phylum 2

tax_superkingdom 1

tax_clade 1

  • Discoba · 7 ✖

bioproject 1

  • PRJNA774958 · 7 ✖

analysis 1

  • blastn · 7 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3303793 3303793 PRJNA774958_P_NODE_27583_length_289_cov_1.768519_g27336_i0 PRJNA774958 27583 289 1.768519 5.1110199100000004 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 346 1.1e-90   NTclustered gi|290991746|ref|XM_002678450.1| 5762 g27336 i0 88.176 1.0242214532872 296 28 100 2 1 289 319 24 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_66128), partial mRNA blastn 296 346 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
3303813 3303813 PRJNA774958_P_NODE_28943_length_280_cov_1.487923_g28696_i0 PRJNA774958 28943 280 1.487923 4.1661844 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 385 2.24e-102   NTclustered gi|290992577|ref|XM_002678865.1| 5762 g28696 i0 92.83 0.946428571428571 265 19 95 0 1 265 265 1 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_83081), partial mRNA blastn 265 385 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
8405706 8405706 PRJNA774958_P_NODE_21367_length_343_cov_1.137037_g21120_i0 PRJNA774958 21367 343 1.137037 3.90003691 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 579 1.1999999999999996e-160   NTclustered gi|290995766|ref|XM_002680408.1| 5762 g21120 i0 97.085 3.97376093294461 343 10 100 0 1 343 406 64 Naegleria gruberi 60S ribosomal protein L13 (NAEGRDRAFT_35692), mRNA blastn 1363 579 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
13506419 13506419 PRJNA774958_P_NODE_30831_length_267_cov_1.092784_g30584_i0 PRJNA774958 30831 267 1.092784 2.91773328 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 472 1.5799999999999998e-128   NTclustered gi|290971318|ref|XM_002668414.1| 5762 g30584 i0 98.502 100.022471910112 267 4 100 0 1 267 10 276 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_61055), partial mRNA blastn 26706 472 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
13506467 13506467 PRJNA774958_P_NODE_34971_length_248_cov_0.880000_g34724_i0 PRJNA774958 34971 248 0.88 2.1824 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 315 2.59e-81   NTclustered gi|291001052|ref|XM_002683047.1| 5762 g34724 i0 91.304 0.92741935483871 230 20 93 0 2 231 2281 2510 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_61244), partial mRNA blastn 230 315 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
17330881 17330881 PRJNA774958_P_NODE_22914_length_328_cov_1.207843_g22667_i0 PRJNA774958 22914 328 1.207843 3.96172504 Leptomonas pyrrhocoris 157538 Euglenozoa other_Eukaryota 331 3.54e-86   NTclustered gi|1002458651|ref|XM_015797866.1| 157538 g22667 i0 86.601 25.8079268292683 306 33 92 8 19 320 80 381 Leptomonas pyrrhocoris putative Ribosomal protein l3 mRNA blastn 8465 331 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leptomonas Leptomonas pyrrhocoris
19879609 19879609 PRJNA774958_P_NODE_37316_length_244_cov_0.900585_g37069_i0 PRJNA774958 37316 244 0.900585 2.1974274 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 351 1.9399999999999998e-92   NTclustered gi|290986269|ref|XM_002675801.1| 5762 g37069 i0 92.623 1 244 18 100 0 1 244 1750 1993 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_49917), partial mRNA blastn 244 351 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;