RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA773778" and tax_phylum = "Mycoplasmatota"

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tax_superkingdom 1

tax_phylum 1

  • Mycoplasmatota · 4 ✖

tax_kingdom 1

bioproject 1

  • PRJNA773778 · 4 ✖

analysis 1

  • blastn · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
14779674 14779674 PRJNA773778_S_NODE_20132_length_328_cov_1.843137_g19982_i0 PRJNA773778 20132 328 1.843137 6.04548936 Candidatus Izemoplasma sp. B36 3242468 Bacteria Bacteria 126 1.79e-24   NTclustered gi|2794178705|gb|CP168077.1| 3242468 g19982 i0 86.441 12.9542682926829 118 12 35 3 181 296 819268 819383 Candidatus Izemoplasma sp. B36 chromosome, complete genome blastn 4249 126 1 Bacteria   Bacillati Mycoplasmatota Mollicutes Candidatus Izemoplasmatales Candidatus Izemoplasmataceae Candidatus Izemoplasma Candidatus Izemoplasma sp. B36
14779798 14779798 PRJNA773778_S_NODE_25892_length_299_cov_2.283186_g25742_i0 PRJNA773778 25892 299 2.283186 6.82672614 Candidatus Izemoplasma sp. B36 3242468 Bacteria Bacteria 211 4.33e-50   NTclustered gi|2794178705|gb|CP168077.1| 3242468 g25742 i0 79.868 14.4080267558528 303 50 99 10 3 299 514547 514844 Candidatus Izemoplasma sp. B36 chromosome, complete genome blastn 4308 211 1 Bacteria   Bacillati Mycoplasmatota Mollicutes Candidatus Izemoplasmatales Candidatus Izemoplasmataceae Candidatus Izemoplasma Candidatus Izemoplasma sp. B36
16053721 16053721 PRJNA773778_S_NODE_34053_length_269_cov_1.571429_g33903_i0 PRJNA773778 34053 269 1.571429 4.22714401 Mariniplasma anaerobium 2735436 Bacteria Bacteria 178 3.9e-40   NTclustered gi|1964073164|dbj|AP024412.1| 2735436 g33903 i0 78.986 9.23791821561338 276 46 100 10 1 269 856174 856444 Mariniplasma anaerobium DNA, complete genome blastn 2485 178 1 Bacteria   Bacillati Mycoplasmatota Mollicutes Acholeplasmatales Acholeplasmataceae Mariniplasma Mariniplasma anaerobium
24978048 24978048 PRJNA773778_S_NODE_43420_length_247_cov_0.885057_g43270_i0 PRJNA773778 43420 247 0.885057 2.18609079 Acholeplasmataceae bacterium 1898209 Bacteria Bacteria 202 2.0899999999999999e-47   NTclustered gi|2621705280|emb|OY763415.1| 1898209 g43270 i0 81.6 6.50607287449393 250 40 100 6 1 247 193801 193555 MAG: Acholeplasmataceae bacterium isolate 742012ca-395f-4069-aabb-f3199e209540 genome assembly, chromosome: 1 blastn 1607 202 1 Bacteria   Bacillati Mycoplasmatota Mollicutes Acholeplasmatales Acholeplasmataceae   Acholeplasmataceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;