RNAquarium Metadata Server
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contig_metadata

5 rows where analysis = "blastn", bioproject = "PRJNA773778" and tax_phylum = "Lenarviricota"

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tax_superkingdom 1

tax_phylum 1

  • Lenarviricota · 5 ✖

tax_kingdom 1

bioproject 1

  • PRJNA773778 · 5 ✖

analysis 1

  • blastn · 5 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
750875 750875 PRJNA773778_S_NODE_2061_length_735_cov_23.874622_g1928_i0 PRJNA773778 2061 735 23.874622 175.4784717 Scleroulivirus miplasmoparae 2956414 Viruses Viruses 71.3 2.03e-7   NTclustered gi|2500381385|ref|NC_076802.1| 2686546 g1928 i0 93.75 0.0653061224489796 48 2 6 1 41 87 2318 2271 Plasmopara viticola lesion associated ourmia-like virus 73 isolate DMS5_37835 RNA dependent RNA polymerase (QKR78_gp1) gene, complete cds blastn 48 71.3 1 Viruses   Orthornavirae Lenarviricota Miaviricetes Ourlivirales Botourmiaviridae Scleroulivirus Scleroulivirus miplasmoparae
10135823 10135823 PRJNA773778_S_NODE_12708_length_392_cov_5.018809_g12558_i0 PRJNA773778 12708 392 5.018809 19.67373128 Botourmiaviridae 2560063 Viruses Viruses 414 4.15e-111   NTclustered gi|2500381397|ref|NC_076804.1| 2686548 g12558 i0 88.252 10.0918367346939 349 38 89 3 2 348 1923 2270 Plasmopara viticola lesion associated ourmia-like virus 75 isolate DMS5_37170 RNA dependent RNA polymerase (QKR80_gp1) gene, complete cds blastn 3956 414 1 Viruses   Orthornavirae Lenarviricota Miaviricetes Ourlivirales Botourmiaviridae Scleroulivirus Scleroulivirus xiplasmoparae
12230828 12230828 PRJNA773778_S_NODE_31530_length_277_cov_6.289216_g31380_i0 PRJNA773778 31530 277 6.289216 17.42112832 Botourmiaviridae sp. 2808997 Viruses Viruses 80.5 1.17e-10   NTclustered gi|2396039641|gb|ON812892.1| 2808997 g31380 i0 94.34 4.24187725631769 53 2 19 1 21 72 2257 2205 MAG: Botourmiaviridae sp. isolate TIGMIC_1, complete genome blastn 1175 80.5 1 Viruses   Orthornavirae Lenarviricota Miaviricetes Ourlivirales Botourmiaviridae   Botourmiaviridae sp.
23703600 23703600 PRJNA773778_S_NODE_10239_length_426_cov_3.036827_g10089_i0 PRJNA773778 10239 426 3.036827 12.93688302 Botourmiaviridae sp. 2808997 Viruses Viruses 697 0   NTclustered gi|2396039894|gb|ON812975.1| 2808997 g10089 i0 96.244 8.92253521126761 426 14 100 2 1 426 552 129 MAG: Botourmiaviridae sp. isolate TIGMIC_19, complete genome blastn 3801 697 1 Viruses   Orthornavirae Lenarviricota Miaviricetes Ourlivirales Botourmiaviridae   Botourmiaviridae sp.
23704090 23704090 PRJNA773778_S_NODE_32659_length_274_cov_1.049751_g32509_i0 PRJNA773778 32659 274 1.049751 2.87631774 Narnavirus sp. 2587225 Viruses Viruses 63.9 1.16e-5   NTclustered gi|2686256130|emb|OZ008437.1| 2587225 g32509 i0 93.182 13.9197080291971 44 1 15 2 1 42 2 45 Apocryptovirus menestheus Segment 2, complete CDS blastn 3814 63.9 1 Viruses   Orthornavirae Lenarviricota Amabiliviricetes Wolframvirales Narnaviridae Narnavirus Narnavirus sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;