RNAquarium Metadata Server
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contig_metadata

15 rows where analysis = "blastn", bioproject = "PRJNA773778" and tax_phylum = "Kitrinoviricota"

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tax_superkingdom 1

tax_phylum 1

  • Kitrinoviricota · 15 ✖

tax_kingdom 1

bioproject 1

  • PRJNA773778 · 15 ✖

analysis 1

  • blastn · 15 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2026814 2026814 PRJNA773778_S_NODE_19722_length_331_cov_1.000000_g19572_i0 PRJNA773778 19722 331 1 3.31 Foveavirus mali 35350 Viruses Viruses 532 9.129999999999998e-147   NTclustered gi|2033663166|gb|MW843002.1| 35350 g19572 i0 96.024 7.89728096676737 327 13 99 0 5 331 1 327 Foveavirus mali isolate Mishima Ct692 coat protein gene, complete cds blastn 2614 532 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Foveavirus Foveavirus mali
3302777 3302777 PRJNA773778_S_NODE_9883_length_432_cov_20.002786_g9733_i0 PRJNA773778 9883 432 20.002786 86.41203552 Potexvirus ecscacti 3433821 Viruses Viruses 758 0   NTclustered gi|1110865423|gb|KX883791.1| 112227 g9733 i0 99.284 39.0578703703704 419 3 97 0 1 419 6192 6610 Cactus virus X strain SCM51431 ORF1, ORF2, ORF3, and ORF4 genes, complete cds blastn 16873 758 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Alphaflexiviridae Potexvirus Potexvirus ecscacti
7129459 7129459 PRJNA773778_S_NODE_14206_length_376_cov_1.125413_g14056_i0 PRJNA773778 14206 376 1.125413 4.23155288 Trichovirus mali 12175 Viruses Viruses 529 1.3599999999999995e-145   NTclustered gi|2426328285|gb|ON001692.1| 12175 g14056 i0 92.225 99.2313829787234 373 29 99 0 4 376 392 20 Apple chlorotic leaf spot virus isolate Kailu1-10 movement protein (mp) gene, partial cds blastn 37311 529 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Trichovirus Trichovirus mali
7129496 7129496 PRJNA773778_S_NODE_16046_length_358_cov_1.350877_g15896_i0 PRJNA773778 16046 358 1.350877 4.83613966 Trichovirus mali 12175 Viruses Viruses 516 1e-141   NTclustered gi|1059048575|gb|KU870525.1| 12175 g15896 i0 92.717 7.91340782122905 357 26 99 0 1 357 3922 3566 Trichovirus mali isolate SY03, complete genome blastn 2833 516 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Trichovirus Trichovirus mali
7129998 7129998 PRJNA773778_S_NODE_37826_length_258_cov_0.886486_g37676_i0 PRJNA773778 37826 258 0.886486 2.28713388 Trichovirus mali 12175 Viruses Viruses 361 3.44e-95   NTclustered gi|1059048575|gb|KU870525.1| 12175 g37676 i0 91.892 4.01937984496124 259 20 100 1 1 258 633 891 Trichovirus mali isolate SY03, complete genome blastn 1037 361 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Trichovirus Trichovirus mali
8403985 8403985 PRJNA773778_S_NODE_15247_length_365_cov_5.537671_g15097_i0 PRJNA773778 15247 365 5.537671 20.21249915 Potexvirus ecschlumbergerae 3433823 Viruses Viruses 580 3.5699999999999985e-161   NTclustered gi|217337293|ref|NC_011659.1| 253700 g15097 i0 97.093 13.2520547945205 344 10 94 0 1 344 6632 6289 Schlumbergera virus X, complete genome blastn 4837 580 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Alphaflexiviridae Potexvirus Potexvirus ecschlumbergerae
12231214 12231214 PRJNA773778_S_NODE_47450_length_242_cov_0.911243_g47300_i0 PRJNA773778 47450 242 0.911243 2.20520806 Foveavirus mali 35350 Viruses Viruses 326 1.16e-84   NTclustered gi|2111969575|gb|MZ148087.1| 35350 g47300 i0 90.909 15.9917355371901 242 22 100 0 1 242 6489 6248 Foveavirus mali isolate 13TF196D, complete genome blastn 3870 326 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Foveavirus Foveavirus mali
13504880 13504880 PRJNA773778_S_NODE_30851_length_280_cov_1.115942_g30701_i0 PRJNA773778 30851 280 1.115942 3.1246376 Citrivirus citri 3427970 Viruses Viruses 71.3 7.12e-8   NTclustered gi|2453161536|dbj|LC758583.1| 129141 g30701 i0 100 15.1607142857143 38 0 14 0 1 38 7560 7523 Citrus leaf blotch virus CNU_JC RNA, complete genome blastn 4245 71.3 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Citrivirus Citrivirus citri
16053595 16053595 PRJNA773778_S_NODE_27953_length_291_cov_1.059633_g27803_i0 PRJNA773778 27953 291 1.059633 3.08353203 Foveavirus mali 35350 Viruses Viruses 488 1.7299999999999995e-133   NTclustered gi|1229033425|gb|KY081219.1| 35350 g27803 i0 96.907 17.8487972508591 291 9 100 0 1 291 658 368 Foveavirus mali isolate YSH9 coat protein gene, complete cds blastn 5194 488 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Foveavirus Foveavirus mali
16053781 16053781 PRJNA773778_S_NODE_36653_length_261_cov_1.228723_g36503_i0 PRJNA773778 36653 261 1.228723 3.20696703 Trichovirus mali 12175 Viruses Viruses 339 1.63e-88   NTclustered gi|1059048575|gb|KU870525.1| 12175 g36503 i0 90.038 18.7509578544061 261 26 100 0 1 261 4698 4438 Trichovirus mali isolate SY03, complete genome blastn 4894 339 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Trichovirus Trichovirus mali
17329937 17329937 PRJNA773778_S_NODE_8634_length_455_cov_4.013089_g8484_i0 PRJNA773778 8634 455 4.013089 18.25955495 Carlavirus vignae 3427805 Viruses Viruses 822 0   NTclustered gi|2017107466|gb|MW354945.1| 67761 g8484 i0 99.339 86.3230769230769 454 3 99 0 2 455 8212 7759 Cowpea mild mottle virus isolate CPMMV_AH_FY, complete genome blastn 39277 822 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus vignae
18603423 18603423 PRJNA773778_S_NODE_8955_length_449_cov_6.848404_g8805_i0 PRJNA773778 8955 449 6.848404 30.74933396 Potexvirus eczygocacti 3433841 Viruses Viruses 815 0   NTclustered gi|828276863|gb|KM288845.1| 253701 g8805 i0 99.553 29.9354120267261 447 2 99 0 3 449 2397 1951 Zygocactus virus X isolate TW-5149-17 replication-associated protein (RdRP) gene, partial cds; and triple gene block protein 1 (TGB1), triple gene block protein 2 (TGB2), triple gene block protein 3 (TGB3), and coat protein (CP) genes, complete cds blastn 13441 815 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Alphaflexiviridae Potexvirus Potexvirus eczygocacti
21153518 21153518 PRJNA773778_S_NODE_2337_length_708_cov_22.752756_g2199_i0 PRJNA773778 2337 708 22.752756 161.08951248 Potexvirus ecscacti 3433821 Viruses Viruses 1242 0   NTclustered gi|37591172|ref|NC_002815.2| 112227 g2199 i0 98.444 50.2485875706215 707 8 99 3 2 708 6614 5911 Cactus virus X, complete genome blastn 35576 1242 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Alphaflexiviridae Potexvirus Potexvirus ecscacti
23704117 23704117 PRJNA773778_S_NODE_33799_length_270_cov_1.172589_g33649_i0 PRJNA773778 33799 270 1.172589 3.1659903 Capillovirus mali 28347 Viruses Viruses 311 3.7e-80   NTclustered gi|2610240357|gb|OQ658831.1| 28347 g33649 i0 87.454 17.037037037037 271 33 100 1 1 270 5566 5296 Capillovirus mali isolate peony/BJ4, complete genome blastn 4600 311 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Capillovirus Capillovirus mali
24978220 24978220 PRJNA773778_S_NODE_6980_length_490_cov_6.426859_g6830_i0 PRJNA773778 6980 490 6.426859 31.4916091 Potexvirus ecspitayae 3433835 Viruses Viruses 571 2.969999999999999e-158   NTclustered gi|2204333791|dbj|LC654699.2| 1176736 g6830 i0 99.057 10.0836734693878 318 3 95 0 1 318 774 1091 Pitaya virus X YA genomic RNA, complete genome blastn 4941 571 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Alphaflexiviridae Potexvirus Potexvirus ecspitayae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;