RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA773778" and tax_phylum = "Chloroflexota"

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tax_superkingdom 1

tax_phylum 1

  • Chloroflexota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA773778 · 3 ✖

analysis 1

  • blastn · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
751110 751110 PRJNA773778_S_NODE_29861_length_283_cov_1.838095_g29711_i0 PRJNA773778 29861 283 1.838095 5.20180885 Pelolinea submarina 913107 Bacteria Bacteria 130 1.17e-25   NTclustered gi|1446038753|dbj|AP018437.1| 913107 g29711 i0 86.555 0.420494699646643 119 15 42 1 1 119 1886538 1886421 Pelolinea submarina MO-CFX1 DNA, complete genome blastn 119 130 1 Bacteria   Bacillati Chloroflexota Anaerolineae Anaerolineales Anaerolineaceae Pelolinea Pelolinea submarina
4578982 4578982 PRJNA773778_S_NODE_15364_length_364_cov_3.642612_g15214_i0 PRJNA773778 15364 364 3.642612 13.25910768 Anaerolineaceae bacterium 2024896 Bacteria Bacteria 473 6.219999999999999e-129   NTclustered gi|2621703607|emb|OY762613.1| 2024896 g15214 i0 90.137 13.2994505494505 365 35 100 1 1 364 2075279 2074915 MAG: Anaerolineaceae bacterium isolate 484d0fed-5884-4132-919b-d0a78980a3b8 genome assembly, chromosome: 1 blastn 4841 473 1 Bacteria   Bacillati Chloroflexota Anaerolineae Anaerolineales Anaerolineaceae   Anaerolineaceae bacterium
5854578 5854578 PRJNA773778_S_NODE_26265_length_298_cov_1.271111_g26115_i0 PRJNA773778 26265 298 1.271111 3.78791078 Anaerolineaceae bacterium 2024896 Bacteria Bacteria 390 5.17e-104   NTclustered gi|2621713652|emb|OY771913.1| 2024896 g26115 i0 90.541 1.9261744966443 296 27 99 1 1 296 611223 610929 MAG: Anaerolineaceae bacterium isolate c74f872c-e933-4053-8305-e1536b6d7914 genome assembly, chromosome: 1 blastn 574 390 1 Bacteria   Bacillati Chloroflexota Anaerolineae Anaerolineales Anaerolineaceae   Anaerolineaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;