RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

29 rows where analysis = "blastn", bioproject = "PRJNA773778" and tax_clade = "Stenosarchaea group"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Stenosarchaea group · 29 ✖

bioproject 1

  • PRJNA773778 · 29 ✖

analysis 1

  • blastn · 29 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
751235 751235 PRJNA773778_S_NODE_35961_length_263_cov_1.489474_g35811_i0 PRJNA773778 35961 263 1.489474 3.91731662 Methanothrix harundinacea 301375 Archaea Archaea 448 2.6199999999999995e-121   NTclustered gi|357208773|gb|CP003117.1| 1110509 g35811 i0 97.338 3.94296577946768 263 7 100 0 1 263 499321 499059 Methanosaeta harundinacea 6Ac, complete genome blastn 1037 448 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanotrichales Methanotrichaceae Methanothrix Methanothrix harundinacea
1207255 1207255 PRJNA773778_S_NODE_32561_length_274_cov_1.263682_g32411_i0 PRJNA773778 32561 274 1.263682 3.46248868 Methanosarcina 2207 Archaea Archaea 462 9.81e-126   NTclustered gi|1654099795|gb|CP029709.1| 2209 g32411 i0 97.08 13.0255474452555 274 8 100 0 1 274 994070 993797 Methanosarcina mazei strain JL01 chromosome blastn 3569 462 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanosarcina Methanosarcina mazei
2026795 2026795 PRJNA773778_S_NODE_18822_length_337_cov_1.087121_g18672_i0 PRJNA773778 18822 337 1.087121 3.66359777 Methanothrix harundinacea 301375 Archaea Archaea 556 5.529999999999999e-154   NTclustered gi|357208773|gb|CP003117.1| 1110509 g18672 i0 96.979 2.98813056379822 331 10 98 0 1 331 484967 485297 Methanosaeta harundinacea 6Ac, complete genome blastn 1007 556 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanotrichales Methanotrichaceae Methanothrix Methanothrix harundinacea
2027381 2027381 PRJNA773778_S_NODE_44122_length_246_cov_1.017341_g43972_i0 PRJNA773778 44122 246 1.017341 2.50265886 Methanothrix harundinacea 301375 Archaea Archaea 438 1.4599999999999996e-118   NTclustered gi|357208773|gb|CP003117.1| 1110509 g43972 i0 98.78 14.3780487804878 246 3 100 0 1 246 499055 498810 Methanosaeta harundinacea 6Ac, complete genome blastn 3537 438 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanotrichales Methanotrichaceae Methanothrix Methanothrix harundinacea
2027486 2027486 PRJNA773778_S_NODE_48282_length_241_cov_0.916667_g48132_i0 PRJNA773778 48282 241 0.916667 2.20916747 Methanofollis formosanus 299308 Archaea Archaea 182 2.65e-41   NTclustered gi|2081619363|gb|CP037968.1| 299308 g48132 i0 80.709 2.10788381742739 254 31 98 7 6 241 2281230 2281483 Methanofollis formosanus strain ML15 chromosome blastn 508 182 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanomicrobiaceae Methanofollis Methanofollis formosanus
2482689 2482689 PRJNA773778_S_NODE_29282_length_285_cov_5.339623_g29132_i0 PRJNA773778 29282 285 5.339623 15.21792555 Methanosarcina 2207 Archaea Archaea 527 3.59e-145   NTclustered gi|2515741548|gb|CP117271.1| 2209 g29132 i0 100 56.7333333333333 285 0 100 0 1 285 1114746 1114462 Mutant Methanosarcina mazei strain Mm Mut 208, complete genome blastn 16169 527 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanosarcina Methanosarcina mazei
4579098 4579098 PRJNA773778_S_NODE_21344_length_321_cov_2.721774_g21194_i0 PRJNA773778 21344 321 2.721774 8.73689454 Methanothrix harundinacea 301375 Archaea Archaea 462 1.17e-125   NTclustered gi|357208773|gb|CP003117.1| 1110509 g21194 i0 93.831 7.69781931464174 308 18 96 1 14 321 2548980 2549286 Methanosaeta harundinacea 6Ac, complete genome blastn 2471 462 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanotrichales Methanotrichaceae Methanothrix Methanothrix harundinacea
4579575 4579575 PRJNA773778_S_NODE_41284_length_250_cov_0.870056_g41134_i0 PRJNA773778 41284 250 0.870056 2.17514 Methanothrix harundinacea 301375 Archaea Archaea 462 8.83e-126   NTclustered gi|357208773|gb|CP003117.1| 1110509 g41134 i0 100 1 250 0 100 0 1 250 1514368 1514119 Methanosaeta harundinacea 6Ac, complete genome blastn 250 462 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanotrichales Methanotrichaceae Methanothrix Methanothrix harundinacea
5854307 5854307 PRJNA773778_S_NODE_13645_length_381_cov_5.581169_g13495_i0 PRJNA773778 13645 381 5.581169 21.26425389 Methanothrix harundinacea 301375 Archaea Archaea 267 1.1899999999999998e-66   NTclustered gi|357208773|gb|CP003117.1| 1110509 g13495 i0 89.524 0.958005249343832 210 22 55 0 1 210 1683616 1683407 Methanosaeta harundinacea 6Ac, complete genome blastn 365 267 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanotrichales Methanotrichaceae Methanothrix Methanothrix harundinacea
6311272 6311272 PRJNA773778_S_NODE_23965_length_308_cov_0.982979_g23815_i0 PRJNA773778 23965 308 0.982979 3.02757532 Methanosarcina 2207 Archaea Archaea 568 2.31e-157   NTclustered gi|2515741548|gb|CP117271.1| 2209 g23815 i0 100 13.2435064935065 307 0 99 0 2 308 2348805 2348499 Mutant Methanosarcina mazei strain Mm Mut 208, complete genome blastn 4079 568 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanosarcina Methanosarcina mazei
8404222 8404222 PRJNA773778_S_NODE_26367_length_297_cov_3.093750_g26217_i0 PRJNA773778 26367 297 3.09375 9.1884375 Methanofollis formosanus 299308 Archaea Archaea 379 1.11e-100   NTclustered gi|2081619363|gb|CP037968.1| 299308 g26217 i0 91.103 22.7575757575758 281 24 95 1 1 281 71565 71286 Methanofollis formosanus strain ML15 chromosome blastn 6759 379 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanomicrobiaceae Methanofollis Methanofollis formosanus
8404338 8404338 PRJNA773778_S_NODE_31547_length_277_cov_3.509804_g31397_i0 PRJNA773778 31547 277 3.509804 9.72215708 Methanothrix harundinacea 301375 Archaea Archaea 512 9.73e-141   NTclustered gi|357208773|gb|CP003117.1| 1110509 g31397 i0 100 5.6028880866426 277 0 100 0 1 277 2549279 2549003 Methanosaeta harundinacea 6Ac, complete genome blastn 1552 512 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanotrichales Methanotrichaceae Methanothrix Methanothrix harundinacea
8404401 8404401 PRJNA773778_S_NODE_34267_length_268_cov_4.902564_g34117_i0 PRJNA773778 34267 268 4.902564 13.13887152 Methanothrix harundinacea 301375 Archaea Archaea 496 9.429999999999999e-136   NTclustered gi|357208773|gb|CP003117.1| 1110509 g34117 i0 100 1 268 0 100 0 1 268 1537607 1537340 Methanosaeta harundinacea 6Ac, complete genome blastn 268 496 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanotrichales Methanotrichaceae Methanothrix Methanothrix harundinacea
11411219 11411219 PRJNA773778_S_NODE_5969_length_520_cov_3.675615_g5819_i0 PRJNA773778 5969 520 3.675615 19.113198 Methanosarcina 2207 Archaea Archaea 953 0   NTclustered gi|452098521|gb|CP004144.1| 1236903 g5819 i0 100 27.0153846153846 516 0 99 0 5 520 1724621 1725136 Methanosarcina mazei Tuc01, complete genome blastn 14048 953 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanosarcina Methanosarcina mazei
12686833 12686833 PRJNA773778_S_NODE_18870_length_336_cov_2.406844_g18720_i0 PRJNA773778 18870 336 2.406844 8.08699584 Methanosarcina 2207 Archaea Archaea 621 1.9299999999999997e-173   NTclustered gi|2047643091|dbj|AP019780.1| 2209 g18720 i0 100 35.9791666666667 336 0 100 0 1 336 2935644 2935309 Methanosarcina mazei TMA DNA, complete genome blastn 12089 621 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanosarcina Methanosarcina mazei
15235710 15235710 PRJNA773778_S_NODE_20232_length_328_cov_0.905882_g20082_i0 PRJNA773778 20232 328 0.905882 2.97129296 Methanosarcina 2207 Archaea Archaea 606 5.249999999999998e-169   NTclustered gi|2515741548|gb|CP117271.1| 2209 g20082 i0 100 35.9481707317073 328 0 100 0 1 328 940765 940438 Mutant Methanosarcina mazei strain Mm Mut 208, complete genome blastn 11791 606 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanosarcina Methanosarcina mazei
16053692 16053692 PRJNA773778_S_NODE_3213_length_635_cov_1.097865_g3068_i0 PRJNA773778 3213 635 1.097865 6.97144275 Methanothrix harundinacea 301375 Archaea Archaea 621 3.83e-173   NTclustered gi|357208773|gb|CP003117.1| 1110509 g3068 i0 91.145 16.7952755905512 463 33 96 6 1 459 555234 555692 Methanosaeta harundinacea 6Ac, complete genome blastn 10665 621 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanotrichales Methanotrichaceae Methanothrix Methanothrix harundinacea
16054033 16054033 PRJNA773778_S_NODE_46033_length_244_cov_0.900585_g45883_i0 PRJNA773778 46033 244 0.900585 2.1974274 Methanofollis formosanus 299308 Archaea Archaea 322 1.52e-83   NTclustered gi|2081619363|gb|CP037968.1| 299308 g45883 i0 90.535 41.2909836065574 243 23 99 0 1 243 1402241 1402483 Methanofollis formosanus strain ML15 chromosome blastn 10075 322 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanomicrobiaceae Methanofollis Methanofollis formosanus
16510134 16510134 PRJNA773778_S_NODE_14333_length_374_cov_2.159468_g14183_i0 PRJNA773778 14333 374 2.159468 8.07641032 Methanosarcina 2207 Archaea Archaea 686 0   NTclustered gi|2515741548|gb|CP117271.1| 2209 g14183 i0 99.733 13 374 1 100 0 1 374 2790619 2790992 Mutant Methanosarcina mazei strain Mm Mut 208, complete genome blastn 4862 686 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanosarcina Methanosarcina mazei
17329471 17329471 PRJNA773778_S_NODE_33674_length_270_cov_2.324873_g33524_i0 PRJNA773778 33674 270 2.324873 6.2771571 Methanofollis formosanus 299308 Archaea Archaea 444 3.49e-120   NTclustered gi|2081619363|gb|CP037968.1| 299308 g33524 i0 96.629 56.8407407407407 267 9 99 0 4 270 2140503 2140237 Methanofollis formosanus strain ML15 chromosome blastn 15347 444 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanomicrobiaceae Methanofollis Methanofollis formosanus
18602992 18602992 PRJNA773778_S_NODE_34615_length_267_cov_2.072165_g34465_i0 PRJNA773778 34615 267 2.072165 5.53268055 Methanothrix harundinacea 301375 Archaea Archaea 265 2.88e-66   NTclustered gi|357208773|gb|CP003117.1| 1110509 g34465 i0 100 65.1985018726592 143 0 100 0 125 267 799111 799253 Methanosaeta harundinacea 6Ac, complete genome blastn 17408 265 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanotrichales Methanotrichaceae Methanothrix Methanothrix harundinacea
19877620 19877620 PRJNA773778_S_NODE_16816_length_351_cov_1.384892_g16666_i0 PRJNA773778 16816 351 1.384892 4.86097092 Methanothrix harundinacea 301375 Archaea Archaea 429 1.31e-115   NTclustered gi|357208773|gb|CP003117.1| 1110509 g16666 i0 91.401 1.77777777777778 314 26 89 1 38 351 554750 555062 Methanosaeta harundinacea 6Ac, complete genome blastn 624 429 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanotrichales Methanotrichaceae Methanothrix Methanothrix harundinacea
19877711 19877711 PRJNA773778_S_NODE_20936_length_324_cov_0.864542_g20786_i0 PRJNA773778 20936 324 0.864542 2.80111608 Methanothrix harundinacea 301375 Archaea Archaea 516 8.979999999999999e-142   NTclustered gi|357208773|gb|CP003117.1| 1110509 g20786 i0 95.37 4.20061728395062 324 15 100 0 1 324 498224 497901 Methanosaeta harundinacea 6Ac, complete genome blastn 1361 516 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanotrichales Methanotrichaceae Methanothrix Methanothrix harundinacea
19877947 19877947 PRJNA773778_S_NODE_32696_length_273_cov_9.755000_g32546_i0 PRJNA773778 32696 273 9.755 26.63115 Methanothrix harundinacea 301375 Archaea Archaea 383 7.82e-102   NTclustered gi|357208773|gb|CP003117.1| 1110509 g32546 i0 91.941 1 273 22 100 0 1 273 1537334 1537606 Methanosaeta harundinacea 6Ac, complete genome blastn 273 383 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanotrichales Methanotrichaceae Methanothrix Methanothrix harundinacea
23703844 23703844 PRJNA773778_S_NODE_21539_length_320_cov_3.497976_g21389_i0 PRJNA773778 21539 320 3.497976 11.1935232 Methanofollis aquaemaris 126734 Archaea Archaea 82.4 3.83e-11   NTclustered gi|2006650972|gb|CP036172.1| 126734 g21389 i0 73.101 1.471875 316 52 95 29 8 312 696607 696314 Methanofollis aquaemaris strain N2F9704 chromosome, complete genome blastn 471 82.4 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanomicrobiaceae Methanofollis Methanofollis aquaemaris
23704370 23704370 PRJNA773778_S_NODE_44459_length_246_cov_0.890173_g44309_i0 PRJNA773778 44459 246 0.890173 2.18982558 Methanothrix sp. 90426 Archaea Archaea 270 5.639999999999999e-68   NTclustered gi|2127856015|gb|CP086252.1| 90426 g44309 i0 86.777 0.983739837398374 242 32 98 0 4 245 1783706 1783947 MAG: Methanothrix sp. isolate MAG 279 chromosome blastn 242 270 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanotrichales Methanotrichaceae Methanothrix Methanothrix sp.
23704480 23704480 PRJNA773778_S_NODE_48239_length_241_cov_1.035714_g48089_i0 PRJNA773778 48239 241 1.035714 2.49607074 Methanothrix harundinacea 301375 Archaea Archaea 440 3.959999999999999e-119   NTclustered gi|312183542|gb|HQ188223.1| 1110509 g48089 i0 99.585 5.98755186721992 241 1 100 0 1 241 1432 1672 Methanosaeta harundinacea clone orf00487 methyl-coenzyme M reductase A gene, complete cds blastn 1443 440 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanotrichales Methanotrichaceae Methanothrix Methanothrix harundinacea
24158952 24158952 PRJNA773778_S_NODE_37099_length_260_cov_1.106952_g36949_i0 PRJNA773778 37099 260 1.106952 2.8780752 Methanosarcina 2207 Archaea Archaea 481 2.55e-131   NTclustered gi|2515741548|gb|CP117271.1| 2209 g36949 i0 100 22.3269230769231 260 0 100 0 1 260 993532 993273 Mutant Methanosarcina mazei strain Mm Mut 208, complete genome blastn 5805 481 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanosarcina Methanosarcina mazei
24978028 24978028 PRJNA773778_S_NODE_42620_length_248_cov_1.108571_g42470_i0 PRJNA773778 42620 248 1.108571 2.74925608 Methanothrix harundinacea 301375 Archaea Archaea 351 1.97e-92   NTclustered gi|357208773|gb|CP003117.1| 1110509 g42470 i0 97.561 2.51209677419355 205 5 83 0 1 205 2480868 2481072 Methanosaeta harundinacea 6Ac, complete genome blastn 623 351 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanotrichales Methanotrichaceae Methanothrix Methanothrix harundinacea

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;