contig_metadata
5 rows where analysis = "blastn", bioproject = "PRJNA773778" and tax_clade = "Discoba"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 3302343 | 3302343 | PRJNA773778_S_NODE_36243_length_262_cov_1.857143_g36093_i0 | PRJNA773778 | 36243 | 262 | 1.857143 | 4.86571466 | Rapaza viridis | 1112050 | Euglenozoa | other_Eukaryota | 202 | 2.24e-47 | NTclustered | gi|383210384|dbj|AB679269.1| | 1112050 | g36093 | i0 | 85.5 | 0.763358778625954 | 200 | 21 | 76 | 6 | 8 | 205 | 1527 | 1334 | Rapaza viridis gene for small subunit ribosomal RNA, partial sequence | blastn | 200 | 202 | 1 | Eukaryota | Discoba | Euglenozoa | Euglenida | Rapazida | Rapazidae | Rapaza | Rapaza viridis | ||
| 7585382 | 7585382 | PRJNA773778_S_NODE_37886_length_257_cov_2.510870_g37736_i0 | PRJNA773778 | 37886 | 257 | 2.51087 | 6.4529359 | Neobodo | 312470 | Euglenozoa | other_Eukaryota | 464 | 2.5299999999999998e-126 | NTclustered | gi|1832418760|gb|MT355131.1| | 2728140 | g37736 | i0 | 99.222 | 74.3618677042802 | 257 | 2 | 100 | 0 | 1 | 257 | 906 | 650 | Neobodo sp. HFCC729 small subunit ribosomal RNA gene, partial sequence | blastn | 19111 | 464 | 1 | Eukaryota | Discoba | Euglenozoa | Kinetoplastea | Neobodonida | Neobodo | Neobodo sp. HFCC729 | |||
| 16053404 | 16053404 | PRJNA773778_S_NODE_19593_length_331_cov_10.895349_g19443_i0 | PRJNA773778 | 19593 | 331 | 10.895349 | 36.06360519 | Naegleria fowleri | 5763 | Heterolobosea | other_Eukaryota | 180 | 1.3699999999999996e-40 | NTclustered | gi|2031924363|emb|OD955780.1| | 5763 | g19443 | i0 | 85.799 | 86.5347432024169 | 169 | 24 | 51 | 0 | 163 | 331 | 1438 | 1270 | Naegleria fowleri Karachi_NF001 strain | blastn | 28643 | 180 | 1 | Eukaryota | Discoba | Heterolobosea | Vahlkampfiidae | Naegleria | Naegleria fowleri | ||||
| 19878238 | 19878238 | PRJNA773778_S_NODE_4416_length_574_cov_4.211577_g4268_i0 | PRJNA773778 | 4416 | 574 | 4.211577 | 24.17445198 | Peranema trichophorum | 56466 | Euglenozoa | other_Eukaryota | 1011 | 0 | NTclustered | gi|427188201|dbj|AB757706.1| | 56466 | g4268 | i0 | 99.11 | 22.698606271777 | 562 | 5 | 98 | 0 | 13 | 574 | 1044 | 483 | Peranema trichophorum rpl3 mRNA for 60S ribosomal protein L3, partial cds, strain: K-01 | blastn | 13029 | 1011 | 1 | Eukaryota | Discoba | Euglenozoa | Euglenida | Heteronematales | Peranemidae | Peranema | Peranema trichophorum | ||
| 23704058 | 23704058 | PRJNA773778_S_NODE_31259_length_278_cov_3.497561_g31109_i0 | PRJNA773778 | 31259 | 278 | 3.497561 | 9.72321958 | Rapaza viridis | 1112050 | Euglenozoa | other_Eukaryota | 278 | 3.88e-70 | NTclustered | gi|383210384|dbj|AB679269.1| | 1112050 | g31109 | i0 | 84.698 | 8.11870503597122 | 281 | 39 | 100 | 3 | 1 | 278 | 99 | 378 | Rapaza viridis gene for small subunit ribosomal RNA, partial sequence | blastn | 2257 | 278 | 1 | Eukaryota | Discoba | Euglenozoa | Euglenida | Rapazida | Rapazidae | Rapaza | Rapaza viridis |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;