RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA773778" and tax_clade = "Bacteria candidate phyla"

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tax_superkingdom 1

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA773778 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9679334 9679334 PRJNA773778_S_NODE_17708_length_344_cov_2.542435_g17558_i0 PRJNA773778 17708 344 2.542435 8.7459764 Candidatus Ozemobacteraceae bacterium 2818468 Bacteria Bacteria 244 5e-60   NTclustered gi|2907625676|emb|OZ223236.1| 2818468 g17558 i0 80.805 42.2151162790698 323 53 92 9 1 318 2527928 2527610 MAG: Candidatus Ozemobacteraceae bacterium isolate 4ee0fdf2-fbb4-4151-bfa0-813162405533 genome assembly, chromosome: 2 blastn 14522 244 1 Bacteria Bacteria candidate phyla     Candidatus Ozemobacteria   Candidatus Ozemobacteraceae   Candidatus Ozemobacteraceae bacterium
22428706 22428706 PRJNA773778_S_NODE_41578_length_249_cov_4.198864_g41428_i0 PRJNA773778 41578 249 4.198864 10.45517136 Candidatus Nomurabacteria bacterium 2052152 Bacteria Bacteria 300 7.29e-77   NTclustered gi|2258875662|gb|CP060232.1| 2052152 g41428 i0 93.532 66.6224899598394 201 13 81 0 1 201 964828 964628 MAG: Candidatus Nomurabacteria bacterium isolate HK-STAS-PATE-40 chromosome, complete genome blastn 16589 300 1 Bacteria Bacteria candidate phyla   Candidatus Nomuraibacteriota         Candidatus Nomurabacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;