contig_metadata
26 rows where analysis = "blastn", bioproject = "PRJNA773625" and tax_kingdom = "Bacillati"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1207122 | 1207122 | PRJNA773625_P_NODE_7481_length_169_cov_0.866667_g7466_i0 | PRJNA773625 | 7481 | 169 | 0.866667 | 1.46466723 | Mycobacterium | 1763 | Bacteria | Bacteria | 202 | 1.32e-47 | NTclustered | gi|1198028085|gb|CP020810.1| | 482462 | g7466 | i0 | 88.166 | 4.69822485207101 | 169 | 20 | 100 | 0 | 1 | 169 | 24507 | 24675 | Mycobacterium dioxanotrophicus strain PH-06 plasmid unnamed1, complete sequence | blastn | 794 | 202 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Mycobacteriaceae | Mycobacterium | Mycobacterium dioxanotrophicus | ||
| 2482556 | 2482556 | PRJNA773625_P_NODE_10262_length_163_cov_0.912281_g10247_i0 | PRJNA773625 | 10262 | 163 | 0.912281 | 1.48701803 | Erysipelotrichales | 526525 | Bacteria | Bacteria | 302 | 1.22e-77 | NTclustered | gi|2777632677|dbj|AP031432.1| | 1982626 | g10247 | i0 | 100 | 14.7668711656442 | 163 | 0 | 100 | 0 | 1 | 163 | 2553175 | 2553013 | Faecalibacillus intestinalis i32-0019-2J8 DNA, complete genome | blastn | 2407 | 302 | 1 | Bacteria | Bacillati | Bacillota | Erysipelotrichia | Erysipelotrichales | Coprobacillaceae | Faecalibacillus | Faecalibacillus intestinalis | ||
| 2482557 | 2482557 | PRJNA773625_P_NODE_11082_length_162_cov_0.920354_g11067_i0 | PRJNA773625 | 11082 | 162 | 0.920354 | 1.49097348 | Cutibacterium | 1912216 | Bacteria | Bacteria | 300 | 4.36e-77 | NTclustered | gi|1446500593|gb|CP031442.1| | 1747 | g11067 | i0 | 100 | 54.2222222222222 | 162 | 0 | 100 | 0 | 1 | 162 | 1252105 | 1251944 | Cutibacterium acnes strain KCOM 1315 chromosome, complete genome | blastn | 8784 | 300 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 5035498 | 5035498 | PRJNA773625_P_NODE_4224_length_210_cov_1.291925_g4209_i0 | PRJNA773625 | 4224 | 210 | 1.291925 | 2.7130425 | Cutibacterium | 1912216 | Bacteria | Bacteria | 388 | 1.24e-103 | NTclustered | gi|1446500593|gb|CP031442.1| | 1747 | g4209 | i0 | 100 | 52.9666666666667 | 210 | 0 | 100 | 0 | 1 | 210 | 1263465 | 1263256 | Cutibacterium acnes strain KCOM 1315 chromosome, complete genome | blastn | 11123 | 388 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 5852929 | 5852929 | PRJNA773625_P_NODE_8345_length_167_cov_0.881356_g8330_i0 | PRJNA773625 | 8345 | 167 | 0.881356 | 1.47186452 | Mycoplasmopsis pulmonis | 2107 | Bacteria | Bacteria | 303 | 3.5e-78 | NTclustered | gi|49311|emb|Z16416.1| | 2107 | g8330 | i0 | 99.401 | 24.1976047904192 | 167 | 1 | 100 | 0 | 1 | 167 | 1270 | 1104 | M.pulmonis DNA for insertion sequence IS1138 encoding putative transposase | blastn | 4041 | 303 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mycoplasmoidales | Metamycoplasmataceae | Mycoplasmopsis | Mycoplasmopsis pulmonis | |||
| 6311171 | 6311171 | PRJNA773625_P_NODE_7765_length_168_cov_0.873950_g7750_i0 | PRJNA773625 | 7765 | 168 | 0.87395 | 1.468236 | Cutibacterium | 1912216 | Bacteria | Bacteria | 311 | 2.11e-80 | NTclustered | gi|1446500593|gb|CP031442.1| | 1747 | g7750 | i0 | 100 | 51.9761904761905 | 168 | 0 | 100 | 0 | 1 | 168 | 1512352 | 1512185 | Cutibacterium acnes strain KCOM 1315 chromosome, complete genome | blastn | 8732 | 311 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 7585216 | 7585216 | PRJNA773625_P_NODE_10566_length_163_cov_0.912281_g10551_i0 | PRJNA773625 | 10566 | 163 | 0.912281 | 1.48701803 | Cutibacterium | 1912216 | Bacteria | Bacteria | 302 | 1.22e-77 | NTclustered | gi|1755605466|dbj|AP019664.1| | 1747 | g10551 | i0 | 100 | 85.9877300613497 | 163 | 0 | 100 | 0 | 1 | 163 | 538283 | 538445 | Cutibacterium acnes TP-CU389 DNA, complete genome | blastn | 14016 | 302 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 8860358 | 8860358 | PRJNA773625_P_NODE_8507_length_167_cov_0.881356_g8492_i0 | PRJNA773625 | 8507 | 167 | 0.881356 | 1.47186452 | Cutibacterium | 1912216 | Bacteria | Bacteria | 309 | 7.53e-80 | NTclustered | gi|1446500593|gb|CP031442.1| | 1747 | g8492 | i0 | 100 | 83.1556886227545 | 167 | 0 | 100 | 0 | 1 | 167 | 2109626 | 2109460 | Cutibacterium acnes strain KCOM 1315 chromosome, complete genome | blastn | 13887 | 309 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 9677819 | 9677819 | PRJNA773625_P_NODE_8648_length_166_cov_0.888889_g8633_i0 | PRJNA773625 | 8648 | 166 | 0.888889 | 1.47555574 | Corynebacterium accolens | 38284 | Bacteria | Bacteria | 307 | 2.69e-79 | NTclustered | gi|2550484788|gb|CP100380.1| | 38284 | g8633 | i0 | 100 | 31.0060240963855 | 166 | 0 | 100 | 0 | 1 | 166 | 2125388 | 2125223 | Corynebacterium accolens strain CA3 chromosome | blastn | 5147 | 307 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Corynebacteriaceae | Corynebacterium | Corynebacterium accolens | ||
| 11410995 | 11410995 | PRJNA773625_P_NODE_8849_length_166_cov_0.888889_g8834_i0 | PRJNA773625 | 8849 | 166 | 0.888889 | 1.47555574 | Cutibacterium | 1912216 | Bacteria | Bacteria | 307 | 2.69e-79 | NTclustered | gi|966542502|gb|CP012354.1| | 1747 | g8834 | i0 | 100 | 53 | 166 | 0 | 100 | 0 | 1 | 166 | 1077994 | 1077829 | Cutibacterium acnes strain PA_12_1_L1 chromosome, complete genome | blastn | 8798 | 307 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 12228926 | 12228926 | PRJNA773625_P_NODE_1970_length_285_cov_4.775424_g1955_i0 | PRJNA773625 | 1970 | 285 | 4.775424 | 13.6099584 | Mycoplasmopsis pulmonis | 2107 | Bacteria | Bacteria | 525 | 1.2899999999999994e-144 | NTclustered | gi|1563796921|emb|LR215008.1| | 2107 | g1955 | i0 | 100 | 139.270175438596 | 284 | 0 | 99 | 0 | 1 | 284 | 799425 | 799142 | Mycoplasma pulmonis strain NCTC10139 genome assembly, chromosome: 1 | blastn | 39692 | 525 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mycoplasmoidales | Metamycoplasmataceae | Mycoplasmopsis | Mycoplasmopsis pulmonis | |||
| 12686760 | 12686760 | PRJNA773625_P_NODE_10610_length_163_cov_0.912281_g10595_i0 | PRJNA773625 | 10610 | 163 | 0.912281 | 1.48701803 | Cutibacterium | 1912216 | Bacteria | Bacteria | 302 | 1.22e-77 | NTclustered | gi|1446500593|gb|CP031442.1| | 1747 | g10595 | i0 | 100 | 57.4846625766871 | 163 | 0 | 100 | 0 | 1 | 163 | 1071213 | 1071375 | Cutibacterium acnes strain KCOM 1315 chromosome, complete genome | blastn | 9370 | 302 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 12686761 | 12686761 | PRJNA773625_P_NODE_8850_length_166_cov_0.888889_g8835_i0 | PRJNA773625 | 8850 | 166 | 0.888889 | 1.47555574 | root | 1 | Root_unresolved | Root_unresolved | 307 | 2.69e-79 | NTclustered | gi|1796975023|gb|CP033086.1| | 1280 | g8835 | i0 | 100 | 99.8915662650602 | 166 | 0 | 100 | 0 | 1 | 166 | 2420644 | 2420809 | Staphylococcus aureus strain WH9628 chromosome | blastn | 16582 | 307 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus aureus | ||
| 13961095 | 13961095 | PRJNA773625_P_NODE_10811_length_162_cov_0.920354_g10796_i0 | PRJNA773625 | 10811 | 162 | 0.920354 | 1.49097348 | Cutibacterium | 1912216 | Bacteria | Bacteria | 300 | 4.36e-77 | NTclustered | gi|1446500593|gb|CP031442.1| | 1747 | g10796 | i0 | 100 | 53.9876543209877 | 162 | 0 | 100 | 0 | 1 | 162 | 2114726 | 2114887 | Cutibacterium acnes strain KCOM 1315 chromosome, complete genome | blastn | 8746 | 300 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 13961098 | 13961098 | PRJNA773625_P_NODE_2911_length_243_cov_1.072165_g2896_i0 | PRJNA773625 | 2911 | 243 | 1.072165 | 2.60536095 | Mycoplasma | 2093 | Bacteria | Bacteria | 444 | 3.09e-120 | NTclustered | gi|54609775|gb|AY765214.1| | 51364 | g2896 | i0 | 99.588 | 187 | 243 | 1 | 100 | 0 | 1 | 243 | 637 | 395 | Mycoplasma cottewii strain ATCC 43093 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence | blastn | 45441 | 444 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mollicutes | Mycoplasmatales | Mycoplasmataceae | Mycoplasma | Mycoplasma cottewii | ||
| 15235630 | 15235630 | PRJNA773625_P_NODE_7912_length_168_cov_0.873950_g7897_i0 | PRJNA773625 | 7912 | 168 | 0.87395 | 1.468236 | Cutibacterium | 1912216 | Bacteria | Bacteria | 311 | 2.11e-80 | NTclustered | gi|1446500593|gb|CP031442.1| | 1747 | g7897 | i0 | 100 | 12 | 168 | 0 | 100 | 0 | 1 | 168 | 637857 | 638024 | Cutibacterium acnes strain KCOM 1315 chromosome, complete genome | blastn | 2016 | 311 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 15235631 | 15235631 | PRJNA773625_P_NODE_7932_length_168_cov_0.873950_g7917_i0 | PRJNA773625 | 7932 | 168 | 0.87395 | 1.468236 | Cutibacterium | 1912216 | Bacteria | Bacteria | 311 | 2.11e-80 | NTclustered | gi|1446500593|gb|CP031442.1| | 1747 | g7917 | i0 | 100 | 67.5357142857143 | 168 | 0 | 100 | 0 | 1 | 168 | 1657754 | 1657921 | Cutibacterium acnes strain KCOM 1315 chromosome, complete genome | blastn | 11346 | 311 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 17327555 | 17327555 | PRJNA773625_P_NODE_10794_length_162_cov_0.920354_g10779_i0 | PRJNA773625 | 10794 | 162 | 0.920354 | 1.49097348 | Dermacoccus nishinomiyaensis | 1274 | Bacteria | Bacteria | 300 | 4.36e-77 | NTclustered | gi|2700497357|gb|CP147844.1| | 1274 | g10779 | i0 | 100 | 3 | 162 | 0 | 100 | 0 | 1 | 162 | 2357897 | 2357736 | Dermacoccus nishinomiyaensis strain GlSt318 chromosome, complete genome | blastn | 486 | 300 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Dermacoccaceae | Dermacoccus | Dermacoccus nishinomiyaensis | ||
| 17327569 | 17327569 | PRJNA773625_P_NODE_11134_length_162_cov_0.920354_g11119_i0 | PRJNA773625 | 11134 | 162 | 0.920354 | 1.49097348 | Corynebacterium tuberculostearicum | 38304 | Bacteria | Bacteria | 300 | 4.36e-77 | NTclustered | gi|2547420364|gb|CP073093.1| | 38304 | g11119 | i0 | 100 | 76.3395061728395 | 162 | 0 | 100 | 0 | 1 | 162 | 1240357 | 1240518 | Corynebacterium tuberculostearicum strain CTNIH12 chromosome, complete genome | blastn | 12367 | 300 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Corynebacteriaceae | Corynebacterium | Corynebacterium tuberculostearicum | ||
| 18601162 | 18601162 | PRJNA773625_P_NODE_9375_length_165_cov_0.896552_g9360_i0 | PRJNA773625 | 9375 | 165 | 0.896552 | 1.4793108 | Staphylococcus cohnii | 29382 | Bacteria | Bacteria | 305 | 9.59e-79 | NTclustered | gi|1373834432|emb|LT963440.1| | 29382 | g9360 | i0 | 100 | 46.460606060606104 | 165 | 0 | 100 | 0 | 1 | 165 | 821894 | 822058 | Staphylococcus cohnii isolate Staphylococcus cohnii ATCC 29974 genome assembly, chromosome: I | blastn | 7666 | 305 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus cohnii | ||
| 19058878 | 19058878 | PRJNA773625_P_NODE_1355_length_338_cov_1.072664_g1341_i0 | PRJNA773625 | 1355 | 338 | 1.072664 | 3.62560432 | root | 1 | Root_unresolved | Root_unresolved | 619 | 6.969999999999999e-173 | NTclustered | gi|1796975023|gb|CP033086.1| | 1280 | g1341 | i0 | 99.704 | 42.9852071005917 | 338 | 1 | 100 | 0 | 1 | 338 | 2426826 | 2426489 | Staphylococcus aureus strain WH9628 chromosome | blastn | 14529 | 619 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus aureus | ||
| 19058881 | 19058881 | PRJNA773625_P_NODE_8695_length_166_cov_0.888889_g8680_i0 | PRJNA773625 | 8695 | 166 | 0.888889 | 1.47555574 | Streptococcus | 1301 | Bacteria | Bacteria | 307 | 2.69e-79 | NTclustered | gi|2886512733|emb|OZ217346.1| | 28037 | g8680 | i0 | 100 | 100 | 166 | 0 | 100 | 0 | 1 | 166 | 2035574 | 2035739 | Streptococcus mitis isolate S. mitis D22 genome assembly, chromosome: 1 | blastn | 16600 | 307 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Streptococcus mitis | ||
| 19876054 | 19876054 | PRJNA773625_P_NODE_7396_length_169_cov_0.866667_g7381_i0 | PRJNA773625 | 7396 | 169 | 0.866667 | 1.46466723 | Gemella haemolysans | 1379 | Bacteria | Bacteria | 279 | 5.95e-71 | NTclustered | gi|1829987927|gb|CP050965.1| | 1379 | g7381 | i0 | 96.45 | 1 | 169 | 6 | 100 | 0 | 1 | 169 | 868634 | 868802 | Gemella haemolysans strain FDAARGOS_740 chromosome | blastn | 169 | 279 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Gemellaceae | Gemella | Gemella haemolysans | ||
| 21151855 | 21151855 | PRJNA773625_P_NODE_4217_length_210_cov_1.515528_g4202_i0 | PRJNA773625 | 4217 | 210 | 1.515528 | 3.1826088 | Peptoniphilus genitalis | 3036303 | Bacteria | Bacteria | 307 | 3.5600000000000005e-79 | NTclustered | gi|2246887130|gb|CP097885.1| | 3036303 | g4202 | i0 | 93.333 | 521.309523809524 | 210 | 11 | 100 | 3 | 1 | 210 | 291223 | 291017 | Peptoniphilus genitalis strain SAHP1 chromosome, complete genome | blastn | 109475 | 307 | 1 | Bacteria | Bacillati | Bacillota | Tissierellia | Tissierellales | Peptoniphilaceae | Peptoniphilus | Peptoniphilus genitalis | ||
| 22426687 | 22426687 | PRJNA773625_P_NODE_7898_length_168_cov_0.873950_g7883_i0 | PRJNA773625 | 7898 | 168 | 0.87395 | 1.468236 | Corynebacterium accolens | 38284 | Bacteria | Bacteria | 233 | 4.7e-57 | NTclustered | gi|2550484788|gb|CP100380.1| | 38284 | g7883 | i0 | 91.667 | 25.0595238095238 | 168 | 14 | 100 | 0 | 1 | 168 | 2017174 | 2017007 | Corynebacterium accolens strain CA3 chromosome | blastn | 4210 | 233 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Corynebacteriaceae | Corynebacterium | Corynebacterium accolens | ||
| 23702249 | 23702249 | PRJNA773625_P_NODE_6519_length_176_cov_1.228346_g6504_i0 | PRJNA773625 | 6519 | 176 | 1.228346 | 2.16188896 | Mycoplasmopsis pulmonis | 2107 | Bacteria | Bacteria | 320 | 3.69e-83 | NTclustered | gi|1563796921|emb|LR215008.1| | 2107 | g6504 | i0 | 99.432 | 2 | 176 | 1 | 100 | 0 | 1 | 176 | 30811 | 30986 | Mycoplasma pulmonis strain NCTC10139 genome assembly, chromosome: 1 | blastn | 352 | 320 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mycoplasmoidales | Metamycoplasmataceae | Mycoplasmopsis | Mycoplasmopsis pulmonis |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;