RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA773247" and tax_phylum = "Candidatus Saccharimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Saccharimonadota · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA773247 · 4 ✖

analysis 1

  • blastn · 4 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
749053 749053 PRJNA773247_P_NODE_3821_length_964_cov_5.941639_g3754_i0 PRJNA773247 3821 964 5.941639 57.27739996 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 959 0   NTclustered gi|1950821269|gb|CP066696.1| 2026720 g3754 i0 84.974 93.6898340248963 945 142 98 0 18 962 485495 484551 Candidatus Saccharibacteria bacterium isolate NC_groundwater_1927_Pr3_S-0.2um_48_6 chromosome blastn 90317 959 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
3300075 3300075 PRJNA773247_P_NODE_27143_length_267_cov_2.453608_g27059_i0 PRJNA773247 27143 267 2.453608 6.55113336 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 130 1.1e-25   NTclustered gi|1958070929|gb|CP064991.1| 2026720 g27059 i0 97.368 24.7303370786517 76 2 28 0 22 97 608455 608380 Candidatus Saccharibacteria bacterium isolate Hirt_18-Q3-R61-65_BAT3C.362_fly chromosome, complete genome blastn 6603 130 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
13502426 13502426 PRJNA773247_P_NODE_14471_length_393_cov_3.562500_g14387_i0 PRJNA773247 14471 393 3.5625 14.000625 Candidatus Saccharibacteria bacterium GW2011_GWC2_44_17 1619070 Bacteria Bacteria 675 0   NTclustered gi|837350690|gb|CP011211.1| 1619070 g14387 i0 98.433 0.974554707379135 383 6 97 0 1 383 517739 518121 Candidatus Saccharibacteria bacterium GW2011_GWC2_44_17, complete genome blastn 383 675 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria bacterium GW2011_GWC2_44_17
15235441 15235441 PRJNA773247_P_NODE_11392_length_458_cov_2.145455_g11309_i0 PRJNA773247 11392 458 2.145455 9.8261839 Bacteria 2 Bacteria Bacteria 399 1.3799999999999995e-106   NTclustered gi|563353835|gb|CP006915.1| 1394711 g11309 i0 83.258 21.3471615720524 442 66 96 7 1 438 357493 357930 Candidatus Saccharibacteria bacterium RAAC3_TM7_1, complete genome blastn 9777 399 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria bacterium RAAC3_TM7_1

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;