RNAquarium Metadata Server
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contig_metadata

9 rows where analysis = "blastn", bioproject = "PRJNA773247" and tax_phylum = "Armatimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Armatimonadota · 9 ✖

tax_kingdom 1

bioproject 1

  • PRJNA773247 · 9 ✖

analysis 1

  • blastn · 9 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4577411 4577411 PRJNA773247_P_NODE_8524_length_552_cov_28.895616_g8441_i0 PRJNA773247 8524 552 28.895616 159.50380032 Fimbriimonadaceae bacterium 2682144 Bacteria Bacteria 89.8 4.14e-13   NTclustered gi|2076449834|gb|CP075365.1| 2682144 g8441 i0 96.364 0.521739130434783 55 1 10 1 156 210 1616886 1616833 MAG: Fimbriimonadaceae bacterium isolate ACE_ARM2 chromosome blastn 288 89.8 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae   Fimbriimonadaceae bacterium
5852366 5852366 PRJNA773247_P_NODE_2085_length_1385_cov_4.661585_g2041_i0 PRJNA773247 2085 1385 4.661585 64.56295225 Fimbriimonas ginsengisoli 1005039 Bacteria Bacteria 1129 0   NTclustered gi|663071213|gb|CP007139.1| 661478 g2041 i0 82.353 94.142238267148 1309 222 94 8 75 1379 4573824 4575127 Fimbriimonas ginsengisoli Gsoil 348, complete genome blastn 130387 1129 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae Fimbriimonas Fimbriimonas ginsengisoli
5852718 5852718 PRJNA773247_P_NODE_8005_length_576_cov_16.817097_g7922_i0 PRJNA773247 8005 576 16.817097 96.86647872 Fimbriimonadaceae bacterium 2682144 Bacteria Bacteria 366 1.7899999999999994e-96   NTclustered gi|2076449834|gb|CP075365.1| 2682144 g7922 i0 78.881 60.4270833333333 554 107 95 9 11 559 553970 554518 MAG: Fimbriimonadaceae bacterium isolate ACE_ARM2 chromosome blastn 34806 366 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae   Fimbriimonadaceae bacterium
9677386 9677386 PRJNA773247_P_NODE_26628_length_270_cov_2.538071_g26544_i0 PRJNA773247 26628 270 2.538071 6.8527917 Fimbriimonas ginsengisoli 1005039 Bacteria Bacteria 167 8.47e-37   NTclustered gi|663071213|gb|CP007139.1| 661478 g26544 i0 78.417 1.02962962962963 278 44 100 12 1 270 637136 637405 Fimbriimonas ginsengisoli Gsoil 348, complete genome blastn 278 167 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae Fimbriimonas Fimbriimonas ginsengisoli
9677551 9677551 PRJNA773247_P_NODE_508_length_2505_cov_11.299342_g497_i0 PRJNA773247 508 2505 11.299342 283.0485171 Fimbriimonas ginsengisoli 1005039 Bacteria Bacteria 1088 0   NTclustered gi|663071213|gb|CP007139.1| 661478 g497 i0 78.331 1.03193612774451 1726 345 68 24 734 2448 4958162 4959869 Fimbriimonas ginsengisoli Gsoil 348, complete genome blastn 2585 1088 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae Fimbriimonas Fimbriimonas ginsengisoli
13502541 13502541 PRJNA773247_P_NODE_20811_length_313_cov_3.058333_g20727_i0 PRJNA773247 20811 313 3.058333 9.57258229 Fimbriimonas sp. 1936159 Bacteria Bacteria 202 2.7499999999999996e-47   NTclustered gi|2778022393|emb|OZ123194.1| 1936159 g20727 i0 81.967 44.3194888178914 244 38 77 5 1 241 343428 343188 MAG: Fimbriimonas sp. isolate MsE-30jul19-LR-01 genome assembly, chromosome: 1 blastn 13872 202 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae Fimbriimonas Fimbriimonas sp.
15235490 15235490 PRJNA773247_P_NODE_20032_length_320_cov_4.060729_g19948_i0 PRJNA773247 20032 320 4.060729 12.9943328 Fimbriimonas 1005038 Bacteria Bacteria 141 6.23e-29   NTclustered gi|663071213|gb|CP007139.1| 661478 g19948 i0 90.654 15.078125 107 8 38 2 206 311 724235 724130 Fimbriimonas ginsengisoli Gsoil 348, complete genome blastn 4825 141 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae Fimbriimonas Fimbriimonas ginsengisoli
16051620 16051620 PRJNA773247_P_NODE_4313_length_886_cov_6.004920_g4240_i0 PRJNA773247 4313 886 6.00492 53.2035912 Armatimonadetes bacterium Uphvl-Ar2 2004468 Bacteria Bacteria 213 3.87e-50   NTclustered gi|1199101103|gb|CP021424.1| 2004468 g4240 i0 76.601 2.65011286681716 406 83 45 11 284 683 994227 994626 Armatimonadetes bacterium Uphvl-Ar2 genome blastn 2348 213 1 Bacteria   Bacillati Armatimonadota         Armatimonadetes bacterium Uphvl-Ar2
22426123 22426123 PRJNA773247_P_NODE_19678_length_324_cov_2.430279_g19594_i0 PRJNA773247 19678 324 2.430279 7.87410396 Fimbriimonadaceae bacterium 2682144 Bacteria Bacteria 130 1.37e-25   NTclustered gi|2076452338|gb|CP075364.1| 2682144 g19594 i0 93.182 11.2098765432099 88 6 31 0 115 202 386815 386902 MAG: Fimbriimonadaceae bacterium isolate ACE_ARM1 chromosome blastn 3632 130 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae   Fimbriimonadaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;