RNAquarium Metadata Server
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contig_metadata

5 rows where analysis = "blastn", bioproject = "PRJNA773247" and tax_kingdom = "Shotokuvirae"

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tax_phylum 2

tax_superkingdom 1

tax_kingdom 1

  • Shotokuvirae · 5 ✖

bioproject 1

  • PRJNA773247 · 5 ✖

analysis 1

  • blastn · 5 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2482420 2482420 PRJNA773247_P_NODE_20222_length_318_cov_7.771429_g20138_i0 PRJNA773247 20222 318 7.771429 24.71314422 Viruses 10239 Viruses Viruses 582 8.549999999999998e-162   NTclustered gi|2496529063|gb|OP577481.1| 3042448 g20138 i0 99.686 3 318 1 100 0 1 318 2554 2237 Psittaciform parvoviridae sp. strain OBP1/FE1/44/2021, partial genome blastn 954 582 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae   Psittaciform parvoviridae sp.
8401894 8401894 PRJNA773247_P_NODE_13407_length_412_cov_3.932153_g13323_i0 PRJNA773247 13407 412 3.932153 16.20047036 Cressdnaviricota sp. 2748378 Viruses Viruses 719 0   NTclustered gi|2717314865|gb|OR224881.1| 2748378 g13323 i0 98.068 6.37378640776699 414 6 100 1 1 412 1207 794 Cressdnaviricota sp. isolate C25N337/AU hypothetical protein gene, complete cds blastn 2626 719 1 Viruses   Shotokuvirae Cressdnaviricota         Cressdnaviricota sp.
10135660 10135660 PRJNA773247_P_NODE_29968_length_252_cov_1.798883_g29884_i0 PRJNA773247 29968 252 1.798883 4.53318516 Viruses 10239 Viruses Viruses 411 3.269999999999999e-110   NTclustered gi|2496529063|gb|OP577481.1| 3042448 g29884 i0 96.032 3 252 10 100 0 1 252 1015 1266 Psittaciform parvoviridae sp. strain OBP1/FE1/44/2021, partial genome blastn 756 411 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae   Psittaciform parvoviridae sp.
13502592 13502592 PRJNA773247_P_NODE_24751_length_282_cov_2.401914_g24667_i0 PRJNA773247 24751 282 2.401914 6.77339748 Cynopterus sphinx circular DNA virus 4 3064087 Viruses Viruses 516 7.67e-142   NTclustered gi|2593361788|gb|OQ267683.1| 3064087 g24667 i0 99.645 1 282 1 100 0 1 282 497 216 MAG: Cynopterus sphinx circular DNA virus 4 isolate 68C4 genomic sequence blastn 282 516 1 Viruses   Shotokuvirae Cressdnaviricota         Cynopterus sphinx circular DNA virus 4
21609149 21609149 PRJNA773247_P_NODE_16317_length_363_cov_260.634483_g16233_i0 PRJNA773247 16317 363 260.634483 946.10317329 Circovirus 39725 Viruses Viruses 649 0   NTclustered gi|2717314922|gb|OR224879.1| 1964372 g16233 i0 100 3.81542699724518 351 0 97 0 13 363 2245 1895 Circovirus sp. isolate C25N74/AU, complete genome blastn 1385 649 1 Viruses   Shotokuvirae Cressdnaviricota Arfiviricetes Cirlivirales Circoviridae Circovirus Circovirus sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;