RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA773247" and tax_kingdom = "Orthornavirae"

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tax_phylum 2

tax_superkingdom 1

tax_kingdom 1

  • Orthornavirae · 2 ✖

bioproject 1

  • PRJNA773247 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
749100 749100 PRJNA773247_P_NODE_5941_length_709_cov_14.858491_g5861_i0 PRJNA773247 5941 709 14.858491 105.34670119 Skokie dicistro-like virus 2789443 Viruses Viruses 1230 0   NTclustered gi|2806502719|gb|PQ054859.1| 2789443 g5861 i0 99.266 1.9605077574048 681 5 96 0 1 681 4643 5323 MAG: Skokie dicistro-like virus isolate QJ5MS4721 genomic sequence blastn 1390 1230 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Dicistroviridae   Skokie dicistro-like virus
8402392 8402392 PRJNA773247_P_NODE_9727_length_507_cov_1.619816_g9644_i0 PRJNA773247 9727 507 1.619816 8.21246712 Sonamyl virus 3131590 Viruses Viruses 82.4 6.33e-11   NTclustered gi|2717322886|gb|PP173891.1| 3131590 g9644 i0 77.564 0.307692307692308 156 22 30 12 295 445 2509 2656 MAG: Sonamyl virus isolate SN2B_k141_68293 genomic sequence blastn 156 82.4 1 Viruses   Orthornavirae Lenarviricota Amabiliviricetes       Sonamyl virus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;