RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA772154" and tax_kingdom = "Thermotogati"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Thermotogati · 2 ✖

bioproject 1

  • PRJNA772154 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10951335 10951335 PRJNA772154_P_NODE_14389_length_287_cov_1.943925_g14204_i0 PRJNA772154 14389 287 1.943925 5.57906475 Deinococcus yunweiensis 367282 Bacteria Bacteria 486 6.139999999999999e-133   NTclustered gi|2890653062|gb|CP177252.1| 367282 g14204 i0 97.222 293.358885017422 288 6 99 2 2 287 2671339 2671626 Deinococcus yunweiensis strain KCTC 3955 chromosome, complete genome blastn 84194 486 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus yunweiensis
14776265 14776265 PRJNA772154_P_NODE_20152_length_248_cov_0.885714_g19967_i0 PRJNA772154 20152 248 0.885714 2.19657072 Thermus sp. NEB1569 2918899 Bacteria Bacteria 448 2.4499999999999996e-121   NTclustered gi|2199052145|gb|CP092445.1| 2918899 g19967 i0 99.194 46.4758064516129 248 2 100 0 1 248 2031402 2031155 Thermus sp. NEB1569 chromosome, complete genome blastn 11526 448 1 Bacteria   Thermotogati Deinococcota Deinococci Thermales Thermaceae Thermus Thermus sp. NEB1569

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;