RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA772154" and tax_kingdom = "Loebvirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Loebvirae · 2 ✖

bioproject 1

  • PRJNA772154 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
12227154 12227154 PRJNA772154_P_NODE_22430_length_243_cov_0.917647_g22245_i0 PRJNA772154 22430 243 0.917647 2.22988221 Ralstonia phage 1 NP-2014 1460070 Viruses Viruses 200 7.39e-47   NTclustered gi|589287117|ref|NC_023586.1| 1460070 g22245 i0 81.633 2.01646090534979 245 41 100 4 1 243 6234 6476 Ralstonia phage 1 NP-2014, complete sequence blastn 490 200 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae   Ralstonia phage 1 NP-2014
24974262 24974262 PRJNA772154_P_NODE_8760_length_392_cov_1.125392_g8575_i0 PRJNA772154 8760 392 1.125392 4.41153664 Ralstonia phage 1 NP-2014 1460070 Viruses Viruses 412 1.4899999999999996e-110   NTclustered gi|589287117|ref|NC_023586.1| 1460070 g8575 i0 93.796 3.5280612244898 274 17 70 0 10 283 4352 4625 Ralstonia phage 1 NP-2014, complete sequence blastn 1383 412 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae   Ralstonia phage 1 NP-2014

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;