RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA771359" and tax_phylum = "Mucoromycota"

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tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA771359 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
12226720 12226720 PRJNA771359_S_NODE_1650_length_263_cov_1.690265_g1567_i0 PRJNA771359 1650 263 1.690265 4.44539695 Mucor mucedo 29922 Fungi Fungi 159 1.38e-34   NTclustered gi|2324046031|ref|XM_051597563.1| 29922 g1567 i0 78.629 2.75285171102662 248 47 93 6 19 263 394 150 Mucor mucedo 60S ribosomal protein L37a (EV154DRAFT_461754), mRNA blastn 724 159 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Mucor Mucor mucedo
17325385 17325385 PRJNA771359_S_NODE_3634_length_176_cov_2.791367_g3551_i0 PRJNA771359 3634 176 2.791367 4.91280592 Acaulospora entreriana 937378 Fungi Fungi 117 5.19e-22   NTclustered gi|365176757|emb|FR750171.1| 937378 g3551 i0 91.667 48.1079545454545 84 7 48 0 1 84 817 900 Acaulospora entreriana 18S rRNA gene (partial), ITS1, 5.8S rRNA gene, ITS2 and 28S rRNA gene (partial), isolate Att1541-1 Ex-type, clone pMK095-4 blastn 8467 117 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Diversisporales Acaulosporaceae Acaulospora Acaulospora entreriana
18598823 18598823 PRJNA771359_S_NODE_4915_length_154_cov_1.598291_g4832_i0 PRJNA771359 4915 154 1.598291 2.46136814 Lichtheimia ornata 688661 Fungi Fungi 113 5.72e-21   NTclustered gi|2553566207|ref|XM_058484142.1| 688661 g4832 i0 81.56 22.3636363636364 141 22 90 4 1 139 1186 1048 Lichtheimia ornata heat shock protein HSS1 (O0I10_004077), partial mRNA blastn 3444 113 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Lichtheimiaceae Lichtheimia Lichtheimia ornata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;