RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA771359" and tax_phylum = "Evosea"

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tax_superkingdom 1

tax_phylum 1

  • Evosea · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA771359 · 3 ✖

analysis 1

  • blastn · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
747051 747051 PRJNA771359_S_NODE_3841_length_171_cov_7.761194_g3758_i0 PRJNA771359 3841 171 7.761194 13.27164174 Cavenderia fasciculata 261658 Evosea other_Eukaryota 250 4.73e-62   NTclustered gi|470237391|ref|XM_004350602.1| 261658 g3758 i0 92.982 99.9239766081871 171 12 100 0 1 171 393 223 Cavenderia fasciculata actin (DFA_11706), partial mRNA blastn 17087 250 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Cavenderiaceae Cavenderia Cavenderia fasciculata
5035091 5035091 PRJNA771359_S_NODE_2944_length_195_cov_2.069620_g2861_i0 PRJNA771359 2944 195 2.06962 4.035759 Flamella 490353 Evosea other_Eukaryota 359 8.87e-95   NTclustered gi|163943979|gb|EU186023.1| 490516 g2861 i0 100 99.4923076923077 194 0 99 0 2 195 928 735 Flamella balnearia 18S ribosomal RNA gene, partial sequence blastn 19401 359 1 Eukaryota Amoebozoa   Evosea Variosea   Flamellidae Flamella Flamella balnearia
24973679 24973679 PRJNA771359_S_NODE_4320_length_163_cov_1.230159_g4237_i0 PRJNA771359 4320 163 1.230159 2.00515917 Heterostelium album 2086695 Evosea other_Eukaryota 62.1 2.26e-5   NTclustered gi|1160575580|ref|XM_020582530.1| 670386 g4237 i0 85.246 1.23312883435583 61 7 37 2 52 111 448 507 Polysphondylium pallidum PN500 S60 ribosomal protein L34 (rpl34), partial mRNA blastn 201 62.1 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Heterostelium Heterostelium album

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;