RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA771359" and tax_phylum = "Ascomycota"

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tax_superkingdom 1

tax_phylum 1

  • Ascomycota · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA771359 · 4 ✖

analysis 1

  • blastn · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2482162 2482162 PRJNA771359_S_NODE_2842_length_199_cov_1.901235_g2759_i0 PRJNA771359 2842 199 1.901235 3.78345765 Sordariaceae 5148 Fungi Fungi 141 3.5800000000000003e-29   NTclustered gi|2749629115|ref|XM_003351658.2| 5147 g2759 i0 85.294 20.8693467336683 136 20 68 0 56 191 394 529 Sordaria macrospora 40S ribosomal protein uS19 (SMAC4_00248), mRNA blastn 4153 141 1 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Sordariales Sordariaceae Sordaria Sordaria macrospora
12686387 12686387 PRJNA771359_S_NODE_5130_length_151_cov_2.754386_g5047_i0 PRJNA771359 5130 151 2.754386 4.15912286 Aspergillus 5052 Fungi Fungi 279 5.19e-71   NTclustered gi|1938233231|gb|MW299281.1| 5065 g5047 i0 100 100.006622516556 151 0 100 0 1 151 652 802 Aspergillus sp. isolate 880356-35--11 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 15101 279 1 Eukaryota Opisthokonta Fungi Ascomycota Eurotiomycetes Eurotiales Aspergillaceae Aspergillus Aspergillus sp.
17784392 17784392 PRJNA771359_S_NODE_4054_length_167_cov_4.023077_g3971_i0 PRJNA771359 4054 167 4.023077 6.71853859 Eurotiales 5042 Fungi Fungi 309 7.53e-80   NTclustered gi|2043739121|gb|MZ267247.1| 5059 g3971 i0 100 100 167 0 100 0 1 167 868 702 Aspergillus flavus strain 3 small subunit ribosomal RNA gene, partial sequence blastn 16700 309 1 Eukaryota Opisthokonta Fungi Ascomycota Eurotiomycetes Eurotiales Aspergillaceae Aspergillus Aspergillus flavus
21608908 21608908 PRJNA771359_S_NODE_2557_length_209_cov_3.116279_g2474_i0 PRJNA771359 2557 209 3.116279 6.51302311 Lipomycetaceae 29827 Fungi Fungi 65.8 2.35e-6   NTclustered gi|1209454364|ref|NG_055346.1| 44089 g2474 i0 97.368 16.2344497607655 38 1 18 0 54 91 1632 1595 Dipodascopsis tothii CBS 759.85 28S rRNA, partial sequence; from TYPE material blastn 3393 65.8 1 Eukaryota Opisthokonta Fungi Ascomycota Lipomycetes Lipomycetales Lipomycetaceae Dipodascopsis Dipodascopsis tothii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;