RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA771359" and tax_phylum = "Armatimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Armatimonadota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA771359 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
747062 747062 PRJNA771359_S_NODE_4341_length_162_cov_5.512000_g4258_i0 PRJNA771359 4341 162 5.512 8.92944 Fimbriimonadaceae bacterium 2682144 Bacteria Bacteria 255 9.570000000000001e-64   NTclustered gi|2076452338|gb|CP075364.1| 2682144 g4258 i0 95.062 28.9074074074074 162 8 100 0 1 162 668789 668950 MAG: Fimbriimonadaceae bacterium isolate ACE_ARM1 chromosome blastn 4683 255 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae   Fimbriimonadaceae bacterium
747084 747084 PRJNA771359_S_NODE_821_length_354_cov_10.227129_g738_i0 PRJNA771359 821 354 10.227129 36.20403666 Fimbriimonadaceae bacterium 2682144 Bacteria Bacteria 403 8.02e-108   NTclustered gi|2076449834|gb|CP075365.1| 2682144 g738 i0 90.492 289.468926553672 305 29 86 0 6 310 1879361 1879665 MAG: Fimbriimonadaceae bacterium isolate ACE_ARM2 chromosome blastn 102472 403 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae   Fimbriimonadaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;