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contig_metadata

6 rows where analysis = "blastn", bioproject = "PRJNA771359" and tax_clade = "delta/epsilon subdivisions"

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tax_superkingdom 1

tax_clade 1

  • delta/epsilon subdivisions · 6 ✖

bioproject 1

  • PRJNA771359 · 6 ✖

analysis 1

  • blastn · 6 ✖

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8400233 8400233 PRJNA771359_S_NODE_147_length_720_cov_13.821376_g76_i0 PRJNA771359 147 720 13.821376 99.5139072 uncultured delta proteobacterium 34034 Bacteria Bacteria 448 7.86e-121   NTclustered gi|2874253888|emb|OY970063.1| 34034 g76 i0 78.984 414.475 709 110 95 28 1 686 628347 629039 MAG: uncultured delta proteobacterium isolate MFD10007.bin.1.119 genome assembly, chromosome: 1 blastn 298422 448 1 Bacteria delta/epsilon subdivisions     Deltaproteobacteria       uncultured delta proteobacterium
8400304 8400304 PRJNA771359_S_NODE_827_length_352_cov_28.698413_g744_i0 PRJNA771359 827 352 28.698413 101.01841376 uncultured delta proteobacterium 34034 Bacteria Bacteria 392 1.7299999999999994e-104   NTclustered gi|374854163|dbj|AP011765.1| 34034 g744 i0 86.932 163.119318181818 352 42 99 4 1 350 13503 13154 Uncultured delta proteobacterium DNA, fosmid clone: JFF046_H12 blastn 57418 392 1 Bacteria delta/epsilon subdivisions     Deltaproteobacteria       uncultured delta proteobacterium
11410560 11410560 PRJNA771359_S_NODE_2369_length_217_cov_78.088889_g2286_i0 PRJNA771359 2369 217 78.088889 169.45288913 Bacteria 2 Bacteria Bacteria 361 2.8e-95   NTclustered gi|927353715|gb|KT322249.1| 34034 g2286 i0 96.774 106.760368663594 217 6 100 1 1 217 242 457 Uncultured delta proteobacterium clone TGR_WLFZ-69 16S ribosomal RNA gene, partial sequence blastn 23167 363 0.994490358126722 Bacteria delta/epsilon subdivisions     Deltaproteobacteria       uncultured delta proteobacterium
12226753 12226753 PRJNA771359_S_NODE_370_length_488_cov_16.379157_g292_i0 PRJNA771359 370 488 16.379157 79.93028616 uncultured delta proteobacterium 34034 Bacteria Bacteria 540 8.33e-149   NTclustered gi|374854163|dbj|AP011765.1| 34034 g292 i0 86.735 152.358606557377 490 60 99 4 1 487 13235 13722 Uncultured delta proteobacterium DNA, fosmid clone: JFF046_H12 blastn 74351 540 1 Bacteria delta/epsilon subdivisions     Deltaproteobacteria       uncultured delta proteobacterium
18598776 18598776 PRJNA771359_S_NODE_1655_length_261_cov_25.044643_g1572_i0 PRJNA771359 1655 261 25.044643 65.36651823 uncultured delta proteobacterium 34034 Bacteria Bacteria 344 3.51e-90   NTclustered gi|374854163|dbj|AP011765.1| 34034 g1572 i0 90.421 173.406130268199 261 25 100 0 1 261 13235 13495 Uncultured delta proteobacterium DNA, fosmid clone: JFF046_H12 blastn 45259 344 1 Bacteria delta/epsilon subdivisions     Deltaproteobacteria       uncultured delta proteobacterium
22424382 22424382 PRJNA771359_S_NODE_818_length_355_cov_19.430818_g735_i0 PRJNA771359 818 355 19.430818 68.9794039 uncultured delta proteobacterium 34034 Bacteria Bacteria 477 4.68e-130   NTclustered gi|374854163|dbj|AP011765.1| 34034 g735 i0 90.986 154.369014084507 355 31 100 1 1 355 13503 13150 Uncultured delta proteobacterium DNA, fosmid clone: JFF046_H12 blastn 54801 477 1 Bacteria delta/epsilon subdivisions     Deltaproteobacteria       uncultured delta proteobacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;