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contig_metadata

20 rows where analysis = "blastn", bioproject = "PRJNA771359" and tax_clade = "Sar"

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tax_phylum 3

tax_superkingdom 1

tax_clade 1

  • Sar · 20 ✖

bioproject 1

  • PRJNA771359 · 20 ✖

analysis 1

  • blastn · 20 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1206719 1206719 PRJNA771359_S_NODE_2341_length_219_cov_3.923077_g2258_i0 PRJNA771359 2341 219 3.923077 8.59153863 Vorticella 60849 SAR_Eukaryotes SAR_Eukaryotes 403 4.64e-108   NTclustered gi|219812771|gb|FJ552985.1| 282477 g2258 i0 100 99.0639269406393 218 0 99 0 1 218 80 297 Uncultured peritrich clone LTSP_EUKA_P1P06 18S ribosomal RNA, 18S-25/28S ribosomal RNA intergenic spacer, partial sequence blastn 21695 403 1 Eukaryota Sar   Ciliophora Oligohymenophorea       uncultured Peritrichia
1206721 1206721 PRJNA771359_S_NODE_2481_length_212_cov_11.685714_g2398_i0 PRJNA771359 2481 212 11.685714 24.77371368 Vorticella 60849 SAR_Eukaryotes SAR_Eukaryotes 387 4.5e-103   NTclustered gi|297664831|gb|GU586177.1| 768686 g2398 i0 99.528 98.1556603773585 212 1 100 0 1 212 551 340 Vorticella sp. 8 PPS-2010 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 20809 387 1 Eukaryota Sar   Ciliophora Oligohymenophorea Sessilida Vorticellidae Vorticella Vorticella sp. 8 PPS-2010
2023051 2023051 PRJNA771359_S_NODE_3382_length_182_cov_7.613793_g3299_i0 PRJNA771359 3382 182 7.613793 13.85710326 Vorticella sp. 4 JG-2011 1295638 SAR_Eukaryotes SAR_Eukaryotes 296 6.48e-76   NTclustered gi|512134943|gb|JX178902.1| 1295638 g3299 i0 96.154 99.6153846153846 182 5 100 2 1 182 1827 1648 Vorticella sp. 4 JG-2011 clone 2 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 18130 296 1 Eukaryota Sar   Ciliophora Oligohymenophorea Sessilida Vorticellidae Vorticella Vorticella sp. 4 JG-2011
4575336 4575336 PRJNA771359_S_NODE_424_length_464_cov_4.887588_g344_i0 PRJNA771359 424 464 4.887588 22.67840832 Hydrurus foetidus 2996 SAR_Eukaryotes SAR_Eukaryotes 108 9.48e-19   NTclustered gi|219903754|emb|FM955257.1| 2996 g344 i0 89.535 18.2370689655172 86 7 18 2 199 282 1850 1765 Hydrurus foetidus partial 28S rRNA gene blastn 8462 108 1 Eukaryota Sar     Chrysophyceae Hydrurales Hydruraceae Hydrurus Hydrurus foetidus
5850545 5850545 PRJNA771359_S_NODE_1365_length_290_cov_29.079051_g1282_i0 PRJNA771359 1365 290 29.079051 84.3292479 Vorticella sp. 4 JG-2011 1295638 SAR_Eukaryotes SAR_Eukaryotes 494 3.71e-135   NTclustered gi|512134943|gb|JX178902.1| 1295638 g1282 i0 98.913 93.0034482758621 276 3 95 0 15 290 1450 1175 Vorticella sp. 4 JG-2011 clone 2 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 26971 494 1 Eukaryota Sar   Ciliophora Oligohymenophorea Sessilida Vorticellidae Vorticella Vorticella sp. 4 JG-2011
5850565 5850565 PRJNA771359_S_NODE_2205_length_225_cov_3.728723_g2122_i0 PRJNA771359 2205 225 3.728723 8.38962675 Plasmodium chabaudi 5825 SAR_Eukaryotes SAR_Eukaryotes 91.6 4.24e-14   NTclustered gi|1027949921|ref|XR_001678647.1| 31271 g2122 i0 78.523 1.75555555555556 149 24 65 6 9 154 1322 1465 Plasmodium chabaudi chabaudi 28S ribosomal RNA (PCHAS_0521461), rRNA blastn 395 91.6 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium chabaudi
5850579 5850579 PRJNA771359_S_NODE_2785_length_201_cov_2.121951_g2702_i0 PRJNA771359 2785 201 2.121951 4.26512151 Nephromyces sp. ex Molgula occidentalis 2544991 SAR_Eukaryotes SAR_Eukaryotes 60.2 1.04e-4   NTclustered gi|1735073273|gb|MK573204.1| 2544991 g2702 i0 91.111 0.223880597014925 45 3 22 1 76 119 26345 26389 Nephromyces sp. ex Molgula occidentalis isolate 638 apicoplast, partial genome blastn 45 60.2 1 Eukaryota Sar   Apicomplexa Aconoidasida Nephromycida   Nephromyces Nephromyces sp. ex Molgula occidentalis
7125801 7125801 PRJNA771359_S_NODE_5166_length_151_cov_1.649123_g5083_i0 PRJNA771359 5166 151 1.649123 2.49017573 Chilodonella hexasticha 1938391 SAR_Eukaryotes SAR_Eukaryotes 268 1.12e-67   NTclustered gi|1389430803|gb|MH341631.1| 1938391 g5083 i0 98.675 61.3708609271523 151 2 100 0 1 151 692 842 Chilodonella hexasticha strain C. hexasticha SC large subunit ribosomal RNA gene, partial sequence blastn 9267 268 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella hexasticha
9675487 9675487 PRJNA771359_S_NODE_3428_length_181_cov_2.701389_g3345_i0 PRJNA771359 3428 181 2.701389 4.88951409 Plasmodium fragile 5857 SAR_Eukaryotes SAR_Eukaryotes 124 3.2099999999999994e-24   NTclustered gi|817740972|ref|XM_012480018.1| 5857 g3345 i0 81.169 3.70718232044199 154 29 85 0 22 175 385 232 Plasmodium fragile ubiquitin-60S ribosomal protein L40 (AK88_02387), partial mRNA blastn 671 124 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium fragile
10135329 10135329 PRJNA771359_S_NODE_1828_length_247_cov_4.895238_g1745_i0 PRJNA771359 1828 247 4.895238 12.09123786 Vorticella 60849 SAR_Eukaryotes SAR_Eukaryotes 455 1.4600000000000002e-123   NTclustered gi|363412151|gb|JN120225.1| 1126581 g1745 i0 100 98.8623481781377 246 0 99 0 2 247 760 515 Vorticella citrina isolate 78vor5253c1wh6S1S2 18S ribosomal RNA gene, partial sequence blastn 24419 455 1 Eukaryota Sar   Ciliophora Oligohymenophorea Sessilida Vorticellidae Vorticella Vorticella citrina
12226710 12226710 PRJNA771359_S_NODE_1090_length_318_cov_13.380783_g1007_i0 PRJNA771359 1090 318 13.380783 42.55088994 uncultured Eimeriidae 404735 SAR_Eukaryotes SAR_Eukaryotes 486 6.889999999999999e-133   NTclustered gi|134022138|gb|EF023488.1| 404735 g1007 i0 94.099 100.729559748428 322 15 100 4 1 318 1630 1309 Eimeriidae environmental sample clone Amb_18S_1074 18S ribosomal RNA gene, partial sequence blastn 32032 486 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae   uncultured Eimeriidae
12226735 12226735 PRJNA771359_S_NODE_2550_length_209_cov_16.482558_g2467_i0 PRJNA771359 2550 209 16.482558 34.44854622 Vorticella sp. 4 JG-2011 1295638 SAR_Eukaryotes SAR_Eukaryotes 198 2.22e-46   NTclustered gi|512134965|gb|JX178924.1| 1295638 g2467 i0 88.889 54.7177033492823 162 17 77 1 1 161 1646 1485 Vorticella sp. 4 JG-2011 clone 24 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 11436 198 1 Eukaryota Sar   Ciliophora Oligohymenophorea Sessilida Vorticellidae Vorticella Vorticella sp. 4 JG-2011
12686382 12686382 PRJNA771359_S_NODE_4250_length_164_cov_1.543307_g4167_i0 PRJNA771359 4250 164 1.543307 2.53102348 Peniculida 33825 SAR_Eukaryotes SAR_Eukaryotes 137 3.67e-28   NTclustered gi|2496410955|gb|OQ869837.1| 2706568 g4167 i0 86.992 63.3536585365854 123 15 74 1 7 128 1642 1520 Frontonia atra isolate S240 large subunit ribosomal RNA gene, partial sequence blastn 10390 137 1 Eukaryota Sar   Ciliophora Oligohymenophorea Peniculida Frontoniidae Frontonia Frontonia atra
16049672 16049672 PRJNA771359_S_NODE_4993_length_153_cov_1.318966_g4910_i0 PRJNA771359 4993 153 1.318966 2.01801798 Carchesium polypinum 168244 SAR_Eukaryotes SAR_Eukaryotes 244 1.93e-60   NTclustered gi|281192505|gb|FJ883553.1| 168244 g4910 i0 95.425 41.4183006535948 153 7 100 0 1 153 532 684 Carchesium polypinum alpha-tubulin gene, partial cds blastn 6337 244 1 Eukaryota Sar   Ciliophora Oligohymenophorea Sessilida Vorticellidae Carchesium Carchesium polypinum
18598793 18598793 PRJNA771359_S_NODE_2675_length_205_cov_1.273810_g2592_i0 PRJNA771359 2675 205 1.27381 2.6113105 Synura petersenii 52555 SAR_Eukaryotes SAR_Eukaryotes 152 1.7199999999999998e-32   NTclustered gi|282936683|gb|GU325065.1| 52555 g2592 i0 80.193 21.7121951219512 207 37 100 4 1 205 91 295 Synura petersenii strain NIES-1007 cytochrome b (cob) gene, partial cds; mitochondrial blastn 4451 152 1 Eukaryota Sar     Synurophyceae Synurales Mallomonadaceae Synura Synura petersenii
19058485 19058485 PRJNA771359_S_NODE_2275_length_222_cov_3.335135_g2192_i0 PRJNA771359 2275 222 3.335135 7.4039997 Peronosporaceae 4777 SAR_Eukaryotes SAR_Eukaryotes 115 2.48e-21   NTclustered gi|2248512796|ref|NC_063789.1| 272952 g2192 i0 90.698 29.3063063063063 86 8 39 0 2 87 8625 8710 Hyaloperonospora arabidopsidis isolate Noks1 mitochondrion, complete genome blastn 6506 115 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Hyaloperonospora Hyaloperonospora arabidopsidis
21149658 21149658 PRJNA771359_S_NODE_637_length_389_cov_16.204545_g554_i0 PRJNA771359 637 389 16.204545 63.03568005 Vorticella sp. 1 2979179 SAR_Eukaryotes SAR_Eukaryotes 636 8.069999999999999e-178   NTclustered gi|2304601489|gb|OP458310.1| 2979179 g554 i0 100 84.1156812339332 344 0 88 0 46 389 1839 1496 Vorticella sp. 1 large subunit ribosomal RNA gene, partial sequence blastn 32721 636 1 Eukaryota Sar   Ciliophora Oligohymenophorea Sessilida Vorticellidae Vorticella Vorticella sp. 1
24158412 24158412 PRJNA771359_S_NODE_3859_length_171_cov_2.350746_g3776_i0 PRJNA771359 3859 171 2.350746 4.01977566 Chilodonella 151076 SAR_Eukaryotes SAR_Eukaryotes 316 4.6e-82   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g3776 i0 100 85.5146198830409 171 0 100 0 1 171 1927 1757 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 14623 316 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
24973632 24973632 PRJNA771359_S_NODE_1620_length_265_cov_1.600877_g1537_i0 PRJNA771359 1620 265 1.600877 4.24232405 Ochromonas danica 2986 SAR_Eukaryotes SAR_Eukaryotes 211 3.78e-50   NTclustered gi|11465862|ref|NC_002571.1| 2986 g1537 i0 81.227 78.8603773584906 277 39 100 8 1 265 33334 33059 Ochromonas danica mitochondrion, complete genome blastn 20898 211 1 Eukaryota Sar     Chrysophyceae Chromulinales Chromulinaceae Ochromonas Ochromonas danica
24973677 24973677 PRJNA771359_S_NODE_4200_length_165_cov_1.390625_g4117_i0 PRJNA771359 4200 165 1.390625 2.29453125 Lithomelissa setosa 1054399 SAR_Eukaryotes SAR_Eukaryotes 150 4.76e-32   NTclustered gi|1133507640|emb|LT673719.1| 1054399 g4117 i0 83.648 6.09090909090909 159 26 96 0 1 159 18 176 Lithomelissa setosa partial mRNA for Ribosomal Protein S14 (rps14 gene), isolate AKK-54 2016 blastn 1005 150 1 Eukaryota Sar     Polycystinea Nassellaria Plagiacanthidae Lithomelissa Lithomelissa setosa

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;