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contig_metadata

17 rows where analysis = "blastn", bioproject = "PRJNA770826" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 17 ✖

bioproject 1

  • PRJNA770826 · 17 ✖

analysis 1

  • blastn · 17 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
746984 746984 PRJNA770826_P_NODE_7861_length_291_cov_2.363636_g7690_i0 PRJNA770826 7861 291 2.363636 6.87818076 Picornaviridae sp. 1530251 Viruses Viruses 392 1.4e-104   NTclustered gi|2780183578|gb|PP818844.1| 1530251 g7690 i0 91.034 0.996563573883162 290 26 99 0 2 291 6577 6288 Picornaviridae sp. polyprotein and capsid protein genes, complete cds blastn 290 392 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Picornaviridae sp.
3298041 3298041 PRJNA770826_P_NODE_13663_length_218_cov_0.923077_g13492_i0 PRJNA770826 13663 218 0.923077 2.01230786 Picornaviridae sp. 1530251 Viruses Viruses 392 1e-104   NTclustered gi|2780183578|gb|PP818844.1| 1530251 g13492 i0 99.083 1 218 2 100 0 1 218 4620 4403 Picornaviridae sp. polyprotein and capsid protein genes, complete cds blastn 218 392 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Picornaviridae sp.
4575168 4575168 PRJNA770826_P_NODE_24184_length_169_cov_0.866667_g24013_i0 PRJNA770826 24184 169 0.866667 1.46466723 Lentivirus humimdef1 3418650 Viruses Viruses 54.7 0.004   NTclustered gi|2509246065|gb|OQ596834.1| 11676 g24013 i0 100 0.171597633136095 29 0 17 0 19 47 4328 4356 HIV-1 isolate CIS06042-V1-CD4-13 from Belgium nonfunctional gag protein (gag) gene, complete sequence; and nonfunctional pol protein (pol) gene, partial sequence blastn 29 54.7 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Lentivirus Lentivirus humimdef1
5850340 5850340 PRJNA770826_P_NODE_11365_length_239_cov_1.368421_g11194_i0 PRJNA770826 11365 239 1.368421 3.27052619 Picornaviridae sp. 1530251 Viruses Viruses 398 2.4e-106   NTclustered gi|2780183578|gb|PP818844.1| 1530251 g11194 i0 97.826 0.96234309623431 230 5 96 0 10 239 7406 7177 Picornaviridae sp. polyprotein and capsid protein genes, complete cds blastn 230 398 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Picornaviridae sp.
7125666 7125666 PRJNA770826_P_NODE_4146_length_424_cov_1.282667_g3975_i0 PRJNA770826 4146 424 1.282667 5.43850808 Caudoviricetes sp. 2832643 Viruses Viruses 704 0   NTclustered gi|2054434277|tpg|BK035998.1| 2832643 g3975 i0 96.69 401.514150943396 423 14 99 0 1 423 18277 17855 MAG TPA_asm: Caudoviricetes sp. isolate ctbaE6, partial genome blastn 170242 704 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
12226633 12226633 PRJNA770826_P_NODE_3670_length_450_cov_1.748130_g3499_i0 PRJNA770826 3670 450 1.74813 7.866585 Picornaviridae sp. 1530251 Viruses Viruses 749 0   NTclustered gi|2780183578|gb|PP818844.1| 1530251 g3499 i0 96.667 1 450 15 100 0 1 450 6716 7165 Picornaviridae sp. polyprotein and capsid protein genes, complete cds blastn 450 749 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Picornaviridae sp.
13500651 13500651 PRJNA770826_P_NODE_28311_length_167_cov_0.881356_g28140_i0 PRJNA770826 28311 167 0.881356 1.47186452 Lentivirus simimdef 3418654 Viruses Viruses 71.3 3.87e-8   NTclustered gi|1378939259|gb|MG931190.1| 11723 g28140 i0 95.455 16.0299401197605 44 2 26 0 67 110 324 281 Simian immunodeficiency virus isolate 092N03Pc_109 envelope glycoprotein (env) gene, partial cds blastn 2677 71.3 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Lentivirus Lentivirus simimdef
13500654 13500654 PRJNA770826_P_NODE_29971_length_167_cov_0.881356_g29800_i0 PRJNA770826 29971 167 0.881356 1.47186452 Caudoviricetes sp. 2832643 Viruses Viruses 303 3.5e-78   NTclustered gi|2914754492|gb|OR221467.1| 2832643 g29800 i0 99.401 3 167 1 100 0 1 167 25698 25864 MAG: Caudoviricetes sp. isolate MSP1619 genomic sequence blastn 501 303 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
17325137 17325137 PRJNA770826_P_NODE_10154_length_253_cov_1.529412_g9983_i0 PRJNA770826 10154 253 1.529412 3.86941236 Picornaviridae sp. 1530251 Viruses Viruses 435 1.95e-117   NTclustered gi|2780183578|gb|PP818844.1| 1530251 g9983 i0 97.628 1 253 6 100 0 1 253 2228 2480 Picornaviridae sp. polyprotein and capsid protein genes, complete cds blastn 253 435 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Picornaviridae sp.
17325195 17325195 PRJNA770826_P_NODE_18034_length_191_cov_1.091549_g17863_i0 PRJNA770826 18034 191 1.091549 2.08485859 Picornaviridae sp. 1530251 Viruses Viruses 326 8.77e-85   NTclustered gi|2780183578|gb|PP818844.1| 1530251 g17863 i0 97.382 1 191 5 100 0 1 191 1727 1917 Picornaviridae sp. polyprotein and capsid protein genes, complete cds blastn 191 326 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Picornaviridae sp.
17325233 17325233 PRJNA770826_P_NODE_26674_length_168_cov_0.873950_g26503_i0 PRJNA770826 26674 168 0.87395 1.468236 Caudoviricetes sp. 2832643 Viruses Viruses 294 2.12e-75   NTclustered gi|2058130956|tpg|BK034114.1| 2832643 g26503 i0 98.225 5.75595238095238 169 2 100 1 1 168 6400 6568 MAG TPA_asm: Caudoviricetes sp. isolate ctp3l1, partial genome blastn 967 294 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
18598566 18598566 PRJNA770826_P_NODE_11915_length_233_cov_1.978261_g11744_i0 PRJNA770826 11915 233 1.978261 4.60934813 Picornaviridae sp. 1530251 Viruses Viruses 392 1.08e-104   NTclustered gi|2780183578|gb|PP818844.1| 1530251 g11744 i0 96.996 1 233 7 100 0 1 233 7647 7415 Picornaviridae sp. polyprotein and capsid protein genes, complete cds blastn 233 392 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Picornaviridae sp.
18598676 18598676 PRJNA770826_P_NODE_33095_length_166_cov_0.888889_g32924_i0 PRJNA770826 33095 166 0.888889 1.47555574 Picornaviridae sp. 1530251 Viruses Viruses 267 4.559999999999999e-67   NTclustered gi|2780183578|gb|PP818844.1| 1530251 g32924 i0 96.319 1.15060240963855 163 5 98 1 1 163 609 770 Picornaviridae sp. polyprotein and capsid protein genes, complete cds blastn 191 267 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Picornaviridae sp.
20333148 20333148 PRJNA770826_P_NODE_39236_length_163_cov_0.912281_g39065_i0 PRJNA770826 39236 163 0.912281 1.48701803 root 1 Root_unresolved Root_unresolved 302 1.22e-77   NTclustered gi|2057959827|tpg|BK046364.1| 2832643 g39065 i0 100 12.8588957055215 163 0 100 0 1 163 31475 31313 MAG TPA_asm: Caudoviricetes sp. isolate ctThn6, partial genome blastn 2096 302 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
21149584 21149584 PRJNA770826_P_NODE_8837_length_272_cov_1.632287_g8666_i0 PRJNA770826 8837 272 1.632287 4.43982064 Caudoviricetes sp. 2832643 Viruses Viruses 62.1 4.15e-5   NTclustered gi|2906149976|gb|PQ646492.1| 2832643 g8666 i0 89.583 0.308823529411765 48 5 18 0 218 265 14529 14576 MAG: Caudoviricetes sp. isolate k127_1042512 genomic sequence blastn 84 62.1 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
23699847 23699847 PRJNA770826_P_NODE_21379_length_175_cov_1.238095_g21208_i0 PRJNA770826 21379 175 1.238095 2.16666625 Caudoviricetes sp. 2832643 Viruses Viruses 252 1.3499999999999999e-62   NTclustered gi|2058130956|tpg|BK034114.1| 2832643 g21208 i0 92.614 4.95428571428571 176 11 100 2 1 175 7566 7392 MAG TPA_asm: Caudoviricetes sp. isolate ctp3l1, partial genome blastn 867 252 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
24973578 24973578 PRJNA770826_P_NODE_4420_length_410_cov_1.872576_g4249_i0 PRJNA770826 4420 410 1.872576 7.6775616 Picornaviridae sp. 1530251 Viruses Viruses 497 4.21e-136   NTclustered gi|2780183578|gb|PP818844.1| 1530251 g4249 i0 88.537 1 410 47 100 0 1 410 5582 5991 Picornaviridae sp. polyprotein and capsid protein genes, complete cds blastn 410 497 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Picornaviridae sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;