contig_metadata
20 rows where analysis = "blastn", bioproject = "PRJNA770826" and tax_phylum = "Verrucomicrobiota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2022897 | 2022897 | PRJNA770826_P_NODE_28442_length_167_cov_0.881356_g28271_i0 | PRJNA770826 | 28442 | 167 | 0.881356 | 1.47186452 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 115 | 1.76e-21 | NTclustered | gi|2874253690|emb|OY969416.1| | 412056 | g28271 | i0 | 81.69 | 1.4251497005988 | 142 | 22 | 84 | 4 | 28 | 167 | 2924528 | 2924389 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD04967.bin.1.157 genome assembly, chromosome: 1 | blastn | 238 | 115 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 3298030 | 3298030 | PRJNA770826_P_NODE_11843_length_234_cov_1.405405_g11672_i0 | PRJNA770826 | 11843 | 234 | 1.405405 | 3.2886477 | Luteolibacter ambystomatis | 2824561 | Bacteria | Bacteria | 167 | 7.1699999999999995e-37 | NTclustered | gi|2029343589|gb|CP073100.1| | 2824561 | g11672 | i0 | 83.243 | 76.2735042735043 | 185 | 28 | 79 | 2 | 34 | 218 | 1557210 | 1557391 | Luteolibacter ambystomatis strain 32A chromosome, complete genome | blastn | 17848 | 167 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Luteolibacter | Luteolibacter ambystomatis | |
| 3298173 | 3298173 | PRJNA770826_P_NODE_7383_length_303_cov_2.362205_g7212_i0 | PRJNA770826 | 7383 | 303 | 2.362205 | 7.15748115 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 52.8 | 0.028 | NTclustered | gi|2874253779|emb|OY969763.1| | 412056 | g7212 | i0 | 100 | 0.0924092409240924 | 28 | 0 | 9 | 0 | 273 | 300 | 162948 | 162975 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD04967.bin.c.2 genome assembly, chromosome: 1 | blastn | 28 | 52.8 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 5850383 | 5850383 | PRJNA770826_P_NODE_17265_length_195_cov_1.027397_g17094_i0 | PRJNA770826 | 17265 | 195 | 1.027397 | 2.00342415 | Sulfuriroseicoccus oceanibius | 2707525 | Bacteria | Bacteria | 130 | 7.57e-26 | NTclustered | gi|1953472588|gb|CP066776.1| | 2707525 | g17094 | i0 | 81.761 | 7.97435897435897 | 159 | 26 | 81 | 3 | 36 | 192 | 524937 | 525094 | Sulfuriroseicoccus oceanibius strain T37 chromosome, complete genome | blastn | 1555 | 130 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Sulfuriroseicoccus | Sulfuriroseicoccus oceanibius | |
| 7125534 | 7125534 | PRJNA770826_P_NODE_10266_length_251_cov_3.386139_g10095_i0 | PRJNA770826 | 10266 | 251 | 3.386139 | 8.49920889 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 326 | 1.21e-84 | NTclustered | gi|2874253690|emb|OY969416.1| | 412056 | g10095 | i0 | 90.323 | 88.1235059760956 | 248 | 24 | 99 | 0 | 1 | 248 | 1316013 | 1316260 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD04967.bin.1.157 genome assembly, chromosome: 1 | blastn | 22119 | 326 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 7125548 | 7125548 | PRJNA770826_P_NODE_12026_length_232_cov_1.595628_g11855_i0 | PRJNA770826 | 12026 | 232 | 1.595628 | 3.70185696 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 268 | 1.89e-67 | NTclustered | gi|2874253690|emb|OY969416.1| | 412056 | g11855 | i0 | 87.712 | 38.9913793103448 | 236 | 22 | 100 | 7 | 1 | 232 | 1316035 | 1316267 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD04967.bin.1.157 genome assembly, chromosome: 1 | blastn | 9046 | 268 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 7125616 | 7125616 | PRJNA770826_P_NODE_24986_length_169_cov_0.866667_g24815_i0 | PRJNA770826 | 24986 | 169 | 0.866667 | 1.46466723 | Verrucomicrobiia bacterium | 2499141 | Bacteria | Bacteria | 165 | 1.74e-36 | NTclustered | gi|2621704341|emb|OY760937.1| | 2499141 | g24815 | i0 | 85.714 | 4.81656804733728 | 161 | 17 | 93 | 6 | 11 | 168 | 3990700 | 3990543 | MAG: Verrucomicrobiae bacterium isolate 066a7682-a1ac-48de-8761-1470dc9e5c3e genome assembly, chromosome: 1 | blastn | 814 | 165 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiia bacterium | ||||
| 9675309 | 9675309 | PRJNA770826_P_NODE_21328_length_175_cov_1.238095_g21157_i0 | PRJNA770826 | 21328 | 175 | 1.238095 | 2.16666625 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 183 | 5.0099999999999996e-42 | NTclustered | gi|2874253690|emb|OY969416.1| | 412056 | g21157 | i0 | 87.421 | 70.1828571428571 | 159 | 20 | 91 | 0 | 1 | 159 | 1931394 | 1931236 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD04967.bin.1.157 genome assembly, chromosome: 1 | blastn | 12282 | 183 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 10135308 | 10135308 | PRJNA770826_P_NODE_41128_length_163_cov_0.912281_g40957_i0 | PRJNA770826 | 41128 | 163 | 0.912281 | 1.48701803 | Nibricoccus | 2576890 | Bacteria | Bacteria | 239 | 9.72e-59 | NTclustered | gi|807238858|gb|CP011265.1| | 1637999 | g40957 | i0 | 93.711 | 75.6993865030675 | 159 | 10 | 98 | 0 | 1 | 159 | 2850763 | 2850921 | Verrucomicrobia bacterium IMCC26134, complete genome | blastn | 12339 | 241 | 0.991701244813278 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobia bacterium IMCC26134 | |||||
| 10950982 | 10950982 | PRJNA770826_P_NODE_24509_length_169_cov_0.866667_g24338_i0 | PRJNA770826 | 24509 | 169 | 0.866667 | 1.46466723 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 230 | 6.0699999999999995e-56 | NTclustered | gi|2874253779|emb|OY969763.1| | 412056 | g24338 | i0 | 91.176 | 7.51479289940828 | 170 | 14 | 100 | 1 | 1 | 169 | 3832495 | 3832664 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD04967.bin.c.2 genome assembly, chromosome: 1 | blastn | 1270 | 230 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 12226638 | 12226638 | PRJNA770826_P_NODE_3830_length_440_cov_1.851662_g3659_i0 | PRJNA770826 | 3830 | 440 | 1.851662 | 8.1473128 | Prosthecobacter fusiformis | 48464 | Bacteria | Bacteria | 713 | 0 | NTclustered | gi|12583974|gb|AF245378.1|AF245378 | 48464 | g3659 | i0 | 95.909 | 198.609090909091 | 440 | 18 | 100 | 0 | 1 | 440 | 1896 | 1457 | Prosthecobacter fusiformis 23S ribosomal RNA gene, partial sequence | blastn | 87388 | 713 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Prosthecobacter | Prosthecobacter fusiformis | |
| 12686309 | 12686309 | PRJNA770826_P_NODE_1050_length_820_cov_2.211414_g922_i0 | PRJNA770826 | 1050 | 820 | 2.211414 | 18.1335948 | Prosthecobacter | 48463 | Bacteria | Bacteria | 1304 | 0 | NTclustered | gi|12583974|gb|AF245378.1|AF245378 | 48464 | g922 | i0 | 95.366 | 286.343902439024 | 820 | 38 | 100 | 0 | 1 | 820 | 601 | 1420 | Prosthecobacter fusiformis 23S ribosomal RNA gene, partial sequence | blastn | 234802 | 1317 | 0.990129081245254 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Prosthecobacter | Prosthecobacter fusiformis | |
| 13960673 | 13960673 | PRJNA770826_P_NODE_3511_length_460_cov_11.284672_g3340_i0 | PRJNA770826 | 3511 | 460 | 11.284672 | 51.9094912 | Verrucomicrobiota | 74201 | Bacteria | Bacteria | 616 | 1.2599999999999999e-171 | NTclustered | gi|183579829|emb|AM905426.1| | 320771 | g3340 | i0 | 90.889 | 193.563043478261 | 461 | 38 | 99 | 4 | 1 | 459 | 1152 | 694 | Bacterium Ellin514 23S rRNA gene, isolate Ellin514 | blastn | 89039 | 616 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Pedosphaerae | Pedosphaerales | Pedosphaeraceae | Pedosphaera | Pedosphaera parvula | |
| 16049599 | 16049599 | PRJNA770826_P_NODE_8293_length_282_cov_1.587983_g8122_i0 | PRJNA770826 | 8293 | 282 | 1.587983 | 4.47811206 | Prosthecobacter fusiformis | 48464 | Bacteria | Bacteria | 383 | 8.12e-102 | NTclustered | gi|12583974|gb|AF245378.1|AF245378 | 48464 | g8122 | i0 | 91.197 | 50.6631205673759 | 284 | 21 | 100 | 3 | 1 | 282 | 487 | 206 | Prosthecobacter fusiformis 23S ribosomal RNA gene, partial sequence | blastn | 14287 | 383 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Prosthecobacter | Prosthecobacter fusiformis | |
| 17325162 | 17325162 | PRJNA770826_P_NODE_1374_length_727_cov_5.480826_g1236_i0 | PRJNA770826 | 1374 | 727 | 5.480826 | 39.84560502 | Verrucomicrobiia bacterium | 2499141 | Bacteria | Bacteria | 693 | 0 | NTclustered | gi|2621704341|emb|OY760937.1| | 2499141 | g1236 | i0 | 84.054 | 122.741403026135 | 740 | 97 | 100 | 17 | 1 | 727 | 3989678 | 3990409 | MAG: Verrucomicrobiae bacterium isolate 066a7682-a1ac-48de-8761-1470dc9e5c3e genome assembly, chromosome: 1 | blastn | 89233 | 693 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiia bacterium | ||||
| 17325243 | 17325243 | PRJNA770826_P_NODE_30534_length_167_cov_0.881356_g30363_i0 | PRJNA770826 | 30534 | 167 | 0.881356 | 1.47186452 | Roseimicrobium sp. ORNL1 | 2711231 | Bacteria | Bacteria | 117 | 4.900000000000001e-22 | NTclustered | gi|1815841271|gb|CP049143.1| | 2711231 | g30363 | i0 | 79.63 | 1.59281437125748 | 162 | 33 | 97 | 0 | 1 | 162 | 5471127 | 5470966 | Roseimicrobium sp. ORNL1 chromosome, complete genome | blastn | 266 | 117 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Roseimicrobium | Roseimicrobium sp. ORNL1 | |
| 18598642 | 18598642 | PRJNA770826_P_NODE_23335_length_169_cov_0.866667_g23164_i0 | PRJNA770826 | 23335 | 169 | 0.866667 | 1.46466723 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 139 | 1.05e-28 | NTclustered | gi|2874253690|emb|OY969416.1| | 412056 | g23164 | i0 | 82.5 | 0.946745562130177 | 160 | 26 | 94 | 2 | 1 | 159 | 1137180 | 1137022 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD04967.bin.1.157 genome assembly, chromosome: 1 | blastn | 160 | 139 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 22424236 | 22424236 | PRJNA770826_P_NODE_3758_length_445_cov_2.497475_g3587_i0 | PRJNA770826 | 3758 | 445 | 2.497475 | 11.11376375 | Prosthecobacter debontii | 48467 | Bacteria | Bacteria | 699 | 0 | NTclustered | gi|164510703|emb|AJ966882.1| | 48467 | g3587 | i0 | 95.056 | 267.61797752809 | 445 | 20 | 100 | 2 | 1 | 445 | 4514 | 4072 | Prosthecobacter debontii 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ala gene, tRNA-Ile gene and ITS1, strain DSM 14044 | blastn | 119090 | 699 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Prosthecobacter | Prosthecobacter debontii | |
| 23699790 | 23699790 | PRJNA770826_P_NODE_139_length_1708_cov_9.696203_g107_i0 | PRJNA770826 | 139 | 1708 | 9.696203 | 165.61114724 | Fontisphaera persica | 2974023 | Bacteria | Bacteria | 1755 | 0 | NTclustered | gi|2439237958|gb|CP116615.1| | 2974023 | g107 | i0 | 85.842 | 183.906908665105 | 1681 | 205 | 97 | 29 | 1 | 1661 | 3862696 | 3861029 | Fontisphaera persica strain B-154 chromosome, complete genome | blastn | 314113 | 1755 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Limisphaerales | Fontisphaeraceae | Fontisphaera | Fontisphaera persica | |
| 23699967 | 23699967 | PRJNA770826_P_NODE_7839_length_292_cov_1.283951_g7668_i0 | PRJNA770826 | 7839 | 292 | 1.283951 | 3.74913692 | Luteolibacter sp. LG18 | 2819286 | Bacteria | Bacteria | 99 | 3.43e-16 | NTclustered | gi|2585939279|dbj|AP024600.1| | 2819286 | g7668 | i0 | 86.517 | 11.2431506849315 | 89 | 12 | 30 | 0 | 54 | 142 | 2545346 | 2545258 | Luteolibacter sp. LG18 DNA, complete genome | blastn | 3283 | 99 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Luteolibacter | Luteolibacter sp. LG18 |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;