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contig_metadata

14 rows where analysis = "blastn", bioproject = "PRJNA770826" and tax_phylum = "Rotifera"

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tax_superkingdom 1

tax_phylum 1

  • Rotifera · 14 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA770826 · 14 ✖

analysis 1

  • blastn · 14 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
746799 746799 PRJNA770826_P_NODE_1081_length_810_cov_4.078844_g952_i0 PRJNA770826 1081 810 4.078844 33.0386364 Brachionus rubens 392764 Rotifera other_Eukaryota 549 2.3699999999999993e-151   NTclustered gi|632795126|gb|KJ489417.1| 392764 g952 i0 84.146 41.8753086419753 574 83 70 7 4 572 300 870 Brachionus rubens chromosome I mitochondrion, complete sequence blastn 33919 549 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus rubens
2022958 2022958 PRJNA770826_P_NODE_522_length_1098_cov_30.746425_g438_i0 PRJNA770826 522 1098 30.746425 337.5957465 Brachionus rubens 392764 Rotifera other_Eukaryota 497 1.19e-135   NTclustered gi|1802791198|gb|MN256531.1| 392764 g438 i0 81.385 25.7167577413479 650 86 58 25 464 1095 11195 11827 Brachionus rubens chromosome I mitochondrion, complete sequence blastn 28237 497 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus rubens
5850359 5850359 PRJNA770826_P_NODE_14405_length_212_cov_1.650307_g14234_i0 PRJNA770826 14405 212 1.650307 3.49865084 Anuraeopsis fissa 885374 Rotifera other_Eukaryota 115 2.3400000000000003e-21   NTclustered gi|308156986|gb|GQ890451.1| 885374 g14234 i0 81.56 0.665094339622642 141 25 67 1 15 155 294 155 Anuraeopsis fissa isolate DNA97 large subunit ribosomal RNA gene, partial sequence blastn 141 115 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Anuraeopsis Anuraeopsis fissa
7125689 7125689 PRJNA770826_P_NODE_5486_length_361_cov_3.201923_g5315_i0 PRJNA770826 5486 361 3.201923 11.55894203 Lecane bulla 96446 Rotifera other_Eukaryota 599 9.749999999999995e-167   NTclustered gi|61200802|gb|AY829083.1| 96446 g5315 i0 96.438 86.983379501385 365 9 100 3 1 361 1721 1357 Lecane bulla 28S ribosomal RNA gene, partial sequence blastn 31401 599 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Lecanidae Lecane Lecane bulla
12226644 12226644 PRJNA770826_P_NODE_4050_length_428_cov_3.063325_g3879_i0 PRJNA770826 4050 428 3.063325 13.111031 Lepadella patella 231622 Rotifera other_Eukaryota 405 2.75e-108   NTclustered gi|83285192|gb|DQ297739.1| 231622 g3879 i0 84.101 69.9883177570093 434 54 100 8 1 428 733 309 Lepadella patella 28S ribosomal RNA gene, partial sequence blastn 29955 405 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Lepadellidae Lepadella Lepadella patella
12226677 12226677 PRJNA770826_P_NODE_6790_length_318_cov_2.821561_g6619_i0 PRJNA770826 6790 318 2.821561 8.97256398 Brachionus plicatilis 10195 Rotifera other_Eukaryota 270 7.56e-68   NTclustered gi|254587481|dbj|AB513493.1| 10195 g6619 i0 86.056 75.9025157232704 251 35 79 0 66 316 57 307 Brachionus plicatilis tef1a mRNA for translation elongation factor 1 alpha, complete cds blastn 24137 270 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus plicatilis
13500694 13500694 PRJNA770826_P_NODE_4091_length_426_cov_2.246684_g3920_i0 PRJNA770826 4091 426 2.246684 9.57087384 Synchaeta pectinata 525906 Rotifera other_Eukaryota 503 9.43e-138   NTclustered gi|403492659|gb|JX193068.1| 525906 g3920 i0 87.559 100.173708920188 426 53 100 0 1 426 423 848 Synchaeta pectinata isolate A458.2 alpha tubulin gene, partial cds blastn 42674 503 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Synchaetidae Synchaeta Synchaeta pectinata
16509653 16509653 PRJNA770826_P_NODE_7953_length_289_cov_2.237500_g7782_i0 PRJNA770826 7953 289 2.2375 6.466375 Ploima 84394 Rotifera other_Eukaryota 394 3.86e-105   NTclustered gi|61200802|gb|AY829083.1| 96446 g7782 i0 91.349 101.311418685121 289 24 100 1 1 289 1437 1724 Lecane bulla 28S ribosomal RNA gene, partial sequence blastn 29279 396 0.994949494949495 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Lecanidae Lecane Lecane bulla
18598666 18598666 PRJNA770826_P_NODE_29755_length_167_cov_0.881356_g29584_i0 PRJNA770826 29755 167 0.881356 1.47186452 Lepadella triba 497826 Rotifera other_Eukaryota 303 3.5e-78   NTclustered gi|166014122|gb|EU252111.1| 497826 g29584 i0 99.401 1.39520958083832 167 1 100 0 1 167 189 23 Lepadella triba internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence blastn 233 303 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Lepadellidae Lepadella Lepadella triba
18598670 18598670 PRJNA770826_P_NODE_30855_length_166_cov_1.341880_g30684_i0 PRJNA770826 30855 166 1.34188 2.2275208 Lecane hamata 1213208 Rotifera other_Eukaryota 183 4.729999999999999e-42   NTclustered gi|1199302037|gb|KY749533.1| 1213208 g30684 i0 86.667 99.5361445783133 165 22 99 0 1 165 413 577 Lecane hamata isolate TIN39AR cytochrome oxidase subunit I (COI) gene, partial cds; mitochondrial blastn 16523 183 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Lecanidae Lecane Lecane hamata
19873744 19873744 PRJNA770826_P_NODE_5916_length_346_cov_1.037037_g5745_i0 PRJNA770826 5916 346 1.037037 3.58814802 Lepadella rhomboides 360666 Rotifera other_Eukaryota 270 8.31e-68   NTclustered gi|83321185|gb|DQ297806.1| 360666 g5745 i0 85.441 80.8208092485549 261 37 75 1 1 261 263 4 Lepadella rhomboides histone H3 gene, partial cds blastn 27964 270 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Lepadellidae Lepadella Lepadella rhomboides
20333127 20333127 PRJNA770826_P_NODE_18676_length_187_cov_1.869565_g18505_i0 PRJNA770826 18676 187 1.869565 3.49608655 Ploima 84394 Rotifera other_Eukaryota 335 1.4199999999999996e-87   NTclustered gi|1957252648|gb|MW484998.1| 1213212 g18505 i0 98.93 100.085561497326 187 2 100 0 1 187 1388 1574 Lecane monostyla voucher NNIBRIV50294 small subunit ribosomal RNA gene, partial sequence blastn 18716 335 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Lecanidae Lecane Lecane monostyla
23699792 23699792 PRJNA770826_P_NODE_1419_length_714_cov_2.645113_g1279_i0 PRJNA770826 1419 714 2.645113 18.88610682 Brachionus urceolaris 204736 Rotifera other_Eukaryota 665 0   NTclustered gi|2057213576|gb|MZ438220.1| 204736 g1279 i0 84.15 92.296918767507 694 102 97 8 19 708 1 690 Brachionus urceolaris isolate Burc_SB cytochrome c oxidase subunit I (COX1) gene, partial cds; mitochondrial blastn 65900 665 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus urceolaris
24973516 24973516 PRJNA770826_P_NODE_2560_length_543_cov_2.809717_g2392_i0 PRJNA770826 2560 543 2.809717 15.25676331 Brachionus plicatilis 10195 Rotifera other_Eukaryota 292 2.89e-74   NTclustered gi|218117260|emb|AM980958.1| 10195 g2392 i0 79.661 3.35174953959484 413 78 76 6 80 489 410 1 Brachionus plicatilis partial mRNA for 40S ribosomal protein S11, (RPS11 gene) blastn 1820 292 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus plicatilis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;