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contig_metadata

30 rows where analysis = "blastn", bioproject = "PRJNA770826" and tax_phylum = "Oomycota"

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tax_superkingdom 1

tax_phylum 1

  • Oomycota · 30 ✖

tax_clade 1

bioproject 1

  • PRJNA770826 · 30 ✖

analysis 1

  • blastn · 30 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2482132 2482132 PRJNA770826_P_NODE_7502_length_300_cov_1.346614_g7331_i0 PRJNA770826 7502 300 1.346614 4.039842 Phytophthora 4783 SAR_Eukaryotes SAR_Eukaryotes 305 1.94e-78   NTclustered gi|183383212|gb|EU595780.1| 4794 g7331 i0 85.616 97.7866666666667 292 40 97 2 2 292 350 640 Phytophthora drechsleri strain ATCC MYA-4163 translation elongation factor 1-alpha (EF1A) gene, partial cds blastn 29336 305 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora drechsleri
3298201 3298201 PRJNA770826_P_NODE_9483_length_262_cov_1.953052_g9312_i0 PRJNA770826 9483 262 1.953052 5.11699624 Phytophthora ramorum 164328 SAR_Eukaryotes SAR_Eukaryotes 143 1.38e-29   NTclustered gi|2794916528|ref|XM_067893497.1| 164328 g9312 i0 81.319 3.04580152671756 182 28 68 6 63 241 1 179 Phytophthora ramorum 60S ribosomal protein L21-B (KRP23_8096), partial mRNA blastn 798 143 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora ramorum
4575103 4575103 PRJNA770826_P_NODE_11724_length_235_cov_1.677419_g11553_i0 PRJNA770826 11724 235 1.677419 3.94193465 Phytophthora cinnamomi 4785 SAR_Eukaryotes SAR_Eukaryotes 230 9.07e-56   NTclustered gi|2795024905|ref|XM_067925247.1| 4785 g11553 i0 86.239 28.736170212766 218 23 92 5 2 217 271 483 Phytophthora cinnamomi ADP/ATP translocase 1 (IUM83_01398), partial mRNA blastn 6753 230 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora cinnamomi
4575243 4575243 PRJNA770826_P_NODE_5584_length_357_cov_2.019481_g5413_i0 PRJNA770826 5584 357 2.019481 7.20954717 Phytophthora sojae 67593 SAR_Eukaryotes SAR_Eukaryotes 230 1.4499999999999995e-55   NTclustered gi|695405840|ref|XM_009525641.1| 67593 g5413 i0 78.857 13.546218487395 350 66 97 7 4 349 168 513 Phytophthora sojae hypothetical protein mRNA blastn 4836 230 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora sojae
5850364 5850364 PRJNA770826_P_NODE_14725_length_210_cov_1.291925_g14554_i0 PRJNA770826 14725 210 1.291925 2.7130425 Aphanomyces astaci 112090 SAR_Eukaryotes SAR_Eukaryotes 311 2.75e-80   NTclustered gi|698780676|ref|XM_009825080.1| 112090 g14554 i0 93.333 80.4904761904762 210 14 100 0 1 210 517 726 Aphanomyces astaci 60S ribosomal protein L8 mRNA blastn 16903 311 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces astaci
5850518 5850518 PRJNA770826_P_NODE_8345_length_281_cov_1.793103_g8174_i0 PRJNA770826 8345 281 1.793103 5.03861943 Achlya klebsiana 4767 SAR_Eukaryotes SAR_Eukaryotes 335 2.3e-87   NTclustered gi|166303|gb|J05116.1|ACKCAL 4767 g8174 i0 89.179 90.5622775800712 268 29 95 0 14 281 493 760 A.klebsiana calmodulin gene, complete cds blastn 25448 335 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Achlyaceae Achlya Achlya klebsiana
7125542 7125542 PRJNA770826_P_NODE_11166_length_241_cov_1.354167_g10995_i0 PRJNA770826 11166 241 1.354167 3.26354247 Aphanomyces invadans 157072 SAR_Eukaryotes SAR_Eukaryotes 156 1.6100000000000002e-33   NTclustered gi|673039918|ref|XM_008875698.1| 157072 g10995 i0 84.615 8.27800829875519 156 24 65 0 8 163 305 460 Aphanomyces invadans hypothetical protein mRNA blastn 1995 156 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces invadans
7125709 7125709 PRJNA770826_P_NODE_7466_length_301_cov_1.448413_g7295_i0 PRJNA770826 7466 301 1.448413 4.35972313 Aphanomyces euteiches 100861 SAR_Eukaryotes SAR_Eukaryotes 161 4.46e-35   NTclustered gi|166051101|emb|CU363198.1| 100861 g7295 i0 79.654 5.84053156146179 231 41 76 4 9 236 540 767 Aphanomyces euteiches cDNA blastn 1758 161 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces euteiches
7584760 7584760 PRJNA770826_P_NODE_3066_length_496_cov_2.006711_g2896_i0 PRJNA770826 3066 496 2.006711 9.95328656 Phytophthora 4783 SAR_Eukaryotes SAR_Eukaryotes 305 3.37e-78   NTclustered gi|169305|gb|M83535.1|PHTCALPIA 4787 g2896 i0 79.762 83.7459677419355 420 85 85 0 70 489 1159 740 P.infestans calmodulin (calA) gene, complete cds blastn 41538 305 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora infestans
8400079 8400079 PRJNA770826_P_NODE_19727_length_182_cov_1.954887_g19556_i0 PRJNA770826 19727 182 1.954887 3.55789434 Aphanomyces invadans 157072 SAR_Eukaryotes SAR_Eukaryotes 82.4 1.97e-11   NTclustered gi|673019533|ref|XM_008865506.1| 157072 g19556 i0 86.486 0.406593406593407 74 10 41 0 98 171 469 542 Aphanomyces invadans hypothetical protein mRNA blastn 74 82.4 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces invadans
8400082 8400082 PRJNA770826_P_NODE_20367_length_179_cov_1.600000_g20196_i0 PRJNA770826 20367 179 1.6 2.864 Phytophthora cinnamomi 4785 SAR_Eukaryotes SAR_Eukaryotes 169 1.4399999999999998e-37   NTclustered gi|2795042802|ref|XM_067923953.1| 4785 g20196 i0 84.571 59.5530726256983 175 21 96 5 8 179 286 457 Phytophthora cinnamomi guanine nucleotide-binding protein subunit beta-like protein (IUM83_00199), partial mRNA blastn 10660 169 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora cinnamomi
8400207 8400207 PRJNA770826_P_NODE_8727_length_274_cov_1.728889_g8556_i0 PRJNA770826 8727 274 1.728889 4.73715586 Phytophthora sojae 67593 SAR_Eukaryotes SAR_Eukaryotes 206 1.83e-48   NTclustered gi|695389557|ref|XM_009521174.1| 67593 g8556 i0 82.553 110.259124087591 235 39 85 2 41 274 4 237 Phytophthora sojae hypothetical protein partial mRNA blastn 30211 206 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora sojae
9675280 9675280 PRJNA770826_P_NODE_15168_length_207_cov_1.835443_g14997_i0 PRJNA770826 15168 207 1.835443 3.79936701 Phytophthora sojae 67593 SAR_Eukaryotes SAR_Eukaryotes 171 4.79e-38   NTclustered gi|695461430|ref|XM_009539927.1| 67593 g14997 i0 82.412 6.05797101449275 199 31 95 4 7 203 256 60 Phytophthora sojae hypothetical protein mRNA blastn 1254 171 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora sojae
9675308 9675308 PRJNA770826_P_NODE_20968_length_177_cov_1.164062_g20797_i0 PRJNA770826 20968 177 1.164062 2.06038974 Phytophthora sojae 67593 SAR_Eukaryotes SAR_Eukaryotes 130 6.72e-26   NTclustered gi|695441736|ref|XM_009534988.1| 67593 g20797 i0 82.119 25.2655367231638 151 27 85 0 24 174 2206 2356 Phytophthora sojae hypothetical protein partial mRNA blastn 4472 130 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora sojae
10135313 10135313 PRJNA770826_P_NODE_5828_length_348_cov_2.337793_g5657_i0 PRJNA770826 5828 348 2.337793 8.13551964 Phytophthora 4783 SAR_Eukaryotes SAR_Eukaryotes 87.9 9.04e-13   NTclustered gi|66270188|gb|AY961478.1| 4787 g5657 i0 77.551 1.61494252873563 147 31 42 2 38 183 5 150 Phytophthora infestans clone MY-09-A-12 ribosomal protein L39 mRNA, complete cds blastn 562 87.9 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora infestans
10951067 10951067 PRJNA770826_P_NODE_5649_length_355_cov_1.189542_g5478_i0 PRJNA770826 5649 355 1.189542 4.2228741 Phytophthora sojae 67593 SAR_Eukaryotes SAR_Eukaryotes 244 5.16e-60   NTclustered gi|695428393|ref|XM_009531646.1| 67593 g5478 i0 84.553 75.7802816901408 246 38 69 0 21 266 646 891 Phytophthora sojae hypothetical protein partial mRNA blastn 26902 244 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora sojae
11410517 11410517 PRJNA770826_P_NODE_18989_length_186_cov_1.138686_g18818_i0 PRJNA770826 18989 186 1.138686 2.11795596 Phytophthora 4783 SAR_Eukaryotes SAR_Eukaryotes 158 3.2799999999999998e-34   NTclustered gi|1036392992|gb|KU682590.1| 4785 g18818 i0 82.258 96.6666666666667 186 30 100 1 1 186 27 209 Phytophthora cinnamomi isolate TW8 cytochrome oxidase subunit I (coxI) gene, partial cds; mitochondrial blastn 17980 158 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora cinnamomi
12226588 12226588 PRJNA770826_P_NODE_22370_length_171_cov_0.901639_g22199_i0 PRJNA770826 22370 171 0.901639 1.54180269 Phytophthora sojae 67593 SAR_Eukaryotes SAR_Eukaryotes 128 2.31e-25   NTclustered gi|695460914|ref|XM_009539807.1| 67593 g22199 i0 91.398 51.8245614035088 93 8 54 0 79 171 354 262 Phytophthora sojae hypothetical protein mRNA blastn 8862 128 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora sojae
12226620 12226620 PRJNA770826_P_NODE_32410_length_166_cov_0.888889_g32239_i0 PRJNA770826 32410 166 0.888889 1.47555574 Saprolegnia parasitica 101203 SAR_Eukaryotes SAR_Eukaryotes 106 1.05e-18   NTclustered gi|813178429|ref|XM_012350294.1| 695850 g32239 i0 87.778 49.0361445783133 90 11 54 0 21 110 984 895 Saprolegnia parasitica CBS 223.65 AGC protein kinase mRNA blastn 8140 106 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Saprolegniaceae Saprolegnia Saprolegnia parasitica
13500666 13500666 PRJNA770826_P_NODE_34831_length_165_cov_0.896552_g34660_i0 PRJNA770826 34831 165 0.896552 1.4793108 Phytophthora sojae 67593 SAR_Eukaryotes SAR_Eukaryotes 111 2.24e-20   NTclustered gi|695428657|ref|XM_009531708.1| 67593 g34660 i0 78.788 6.94545454545455 165 35 100 0 1 165 343 179 Phytophthora sojae hypothetical protein partial mRNA blastn 1146 111 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora sojae
13960660 13960660 PRJNA770826_P_NODE_17651_length_192_cov_2.909091_g17480_i0 PRJNA770826 17651 192 2.909091 5.58545472 Phytophthora 4783 SAR_Eukaryotes SAR_Eukaryotes 134 5.740000000000001e-27   NTclustered gi|2795029237|ref|XM_067937609.1| 4785 g17480 i0 85.714 3.75520833333333 126 18 66 0 67 192 58 183 Phytophthora cinnamomi 40S ribosomal protein S14 (IUM83_12961), partial mRNA blastn 721 134 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora cinnamomi
14775752 14775752 PRJNA770826_P_NODE_17972_length_191_cov_1.098592_g17801_i0 PRJNA770826 17972 191 1.098592 2.09831072 Phytophthora cinnamomi 4785 SAR_Eukaryotes SAR_Eukaryotes 154 4.38e-33   NTclustered gi|2795054310|ref|XM_067932956.1| 4785 g17801 i0 82.486 49.2251308900524 177 29 92 2 16 191 1 176 Phytophthora cinnamomi 60S ribosomal protein L21-1 (IUM83_08575), partial mRNA blastn 9402 154 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora cinnamomi
15235221 15235221 PRJNA770826_P_NODE_9312_length_265_cov_1.925926_g9141_i0 PRJNA770826 9312 265 1.925926 5.1037039 Phytophthora 4783 SAR_Eukaryotes SAR_Eukaryotes 174 4.95e-39   NTclustered gi|2795051631|ref|XM_067944120.1| 4785 g9141 i0 86.25 53.5207547169811 160 22 60 0 3 162 209 368 Phytophthora cinnamomi 60S ribosomal protein L18a (IUM83_19091), partial mRNA blastn 14183 174 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora cinnamomi
16049428 16049428 PRJNA770826_P_NODE_11973_length_233_cov_1.125000_g11802_i0 PRJNA770826 11973 233 1.125 2.62125 Achlya bisexualis 4766 SAR_Eukaryotes SAR_Eukaryotes 204 5.439999999999999e-48   NTclustered gi|2289|emb|X59936.1| 4766 g11802 i0 88.235 70.5965665236051 170 20 73 0 7 176 170 1 A.bisexualis gene for actin blastn 16449 204 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Achlyaceae Achlya Achlya bisexualis
16049431 16049431 PRJNA770826_P_NODE_12513_length_227_cov_1.460674_g12342_i0 PRJNA770826 12513 227 1.460674 3.31572998 Saprolegnia diclina 112098 SAR_Eukaryotes SAR_Eukaryotes 161 3.22e-35   NTclustered gi|669165645|ref|XM_008620163.1| 1156394 g12342 i0 82.609 3.59911894273128 184 30 81 2 20 202 287 105 Saprolegnia diclina VS20 caltractin mRNA blastn 817 161 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Saprolegniaceae Saprolegnia Saprolegnia diclina
16049497 16049497 PRJNA770826_P_NODE_22513_length_170_cov_1.289256_g22342_i0 PRJNA770826 22513 170 1.289256 2.1917352 Phytophthora sojae 67593 SAR_Eukaryotes SAR_Eukaryotes 132 1.78e-26   NTclustered gi|695386086|ref|XM_009520166.1| 67593 g22342 i0 82.278 8.28823529411765 158 22 91 5 7 161 947 793 Phytophthora sojae hypothetical protein mRNA blastn 1409 132 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora sojae
17325165 17325165 PRJNA770826_P_NODE_14074_length_215_cov_0.939759_g13903_i0 PRJNA770826 14074 215 0.939759 2.02048185 Saprolegnia parasitica 101203 SAR_Eukaryotes SAR_Eukaryotes 132 2.37e-26   NTclustered gi|813164477|ref|XM_012347909.1| 695850 g13903 i0 78.182 1.63255813953488 220 38 100 10 1 215 753 539 Saprolegnia parasitica CBS 223.65 serine hydroxymethyltransferase mRNA blastn 351 132 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Saprolegniaceae Saprolegnia Saprolegnia parasitica
19873746 19873746 PRJNA770826_P_NODE_6176_length_336_cov_7.466899_g6005_i0 PRJNA770826 6176 336 7.466899 25.08878064 Saprolegnia parasitica 101203 SAR_Eukaryotes SAR_Eukaryotes 174 6.48e-39   NTclustered gi|813157874|ref|XM_012346896.1| 695850 g6005 i0 77.936 29.1309523809524 281 60 83 2 43 322 74 353 Saprolegnia parasitica CBS 223.65 hypothetical protein mRNA blastn 9788 174 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Saprolegniaceae Saprolegnia Saprolegnia parasitica
23699970 23699970 PRJNA770826_P_NODE_8339_length_281_cov_2.241379_g8168_i0 PRJNA770826 8339 281 2.241379 6.29827499 Plectospira myriandra 100863 SAR_Eukaryotes SAR_Eukaryotes 137 6.949999999999999e-28   NTclustered gi|59894157|gb|AY729861.1| 100863 g8168 i0 77.444 1.45195729537367 266 36 89 20 25 273 461 719 Plectospira myriandra heat shock protein 90 gene, partial cds blastn 408 137 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Plectospira Plectospira myriandra
24158383 24158383 PRJNA770826_P_NODE_899_length_884_cov_10.171257_g780_i0 PRJNA770826 899 884 10.171257 89.91391188 Saprolegnia 4769 SAR_Eukaryotes SAR_Eukaryotes 411 1.28e-109   NTclustered gi|813150484|ref|XM_012345499.1| 695850 g780 i0 77.842 62.4852941176471 695 132 77 17 157 840 752 69 Saprolegnia parasitica CBS 223.65 40S ribosomal protein S3a-2 mRNA blastn 55237 411 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Saprolegniaceae Saprolegnia Saprolegnia parasitica

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;