RNAquarium Metadata Server
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contig_metadata

1 row where analysis = "blastn", bioproject = "PRJNA770826" and tax_phylum = "Onychophora"

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tax_superkingdom 1

tax_phylum 1

  • Onychophora · 1 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA770826 · 1 ✖

analysis 1

  • blastn · 1 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
23699861 23699861 PRJNA770826_P_NODE_25239_length_168_cov_2.579832_g25068_i0 PRJNA770826 25239 168 2.579832 4.33411776 Peripatopsis capensis 88308 Onychophora other_Eukaryota 219 1.3099999999999999e-52   NTclustered gi|576941953|gb|KC754685.1| 88308 g25068 i0 92.208 92.7916666666667 154 12 92 0 1 154 776 929 Peripatopsis capensis voucher DNA103888 cytochrome oxidase subunit 1 (COI) gene, partial cds; mitochondrial blastn 15589 219 1 Eukaryota Opisthokonta Metazoa Onychophora Udeonychophora Euonychophora Peripatopsidae Peripatopsis Peripatopsis capensis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;