contig_metadata
13 rows where analysis = "blastn", bioproject = "PRJNA770826" and tax_phylum = "Nematoda"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 746905 | 746905 | PRJNA770826_P_NODE_3401_length_470_cov_2.095012_g3230_i0 | PRJNA770826 | 3401 | 470 | 2.095012 | 9.8465564 | Caenorhabditis briggsae | 6238 | Nematoda | Nematoda | 287 | 1.15e-72 | NTclustered | gi|268536293|ref|XM_002633236.1| | 6238 | g3230 | i0 | 79.949 | 90.2744680851064 | 389 | 78 | 83 | 0 | 22 | 410 | 633 | 245 | Caenorhabditis briggsae Protein CBR-RPS-5 (Cbr-rps-5), partial mRNA | blastn | 42429 | 287 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Rhabditidae | Caenorhabditis | Caenorhabditis briggsae | |
| 2022956 | 2022956 | PRJNA770826_P_NODE_5162_length_374_cov_1.880000_g4991_i0 | PRJNA770826 | 5162 | 374 | 1.88 | 7.0312 | Pristionchus sp. 15 RS5229 | 452809 | Nematoda | Nematoda | 204 | 9.28e-48 | NTclustered | gi|150982261|gb|EF634719.1| | 452809 | g4991 | i0 | 86.096 | 9.48128342245989 | 187 | 26 | 50 | 0 | 188 | 374 | 303 | 117 | Pristionchus sp. 15 RS5229 large subunit ribosomal protein 30 (rpl-30) mRNA, partial cds | blastn | 3546 | 204 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Neodiplogasteridae | Pristionchus | Pristionchus sp. 15 RS5229 | |
| 3298115 | 3298115 | PRJNA770826_P_NODE_34383_length_165_cov_0.896552_g34212_i0 | PRJNA770826 | 34383 | 165 | 0.896552 | 1.4793108 | Caenorhabditis elegans | 6239 | Nematoda | Nematoda | 139 | 1.03e-28 | NTclustered | gi|3217630|emb|AL023815.1| | 6239 | g34212 | i0 | 81.928 | 64.7454545454545 | 166 | 28 | 100 | 2 | 1 | 165 | 6124 | 6288 | Caenorhabditis elegans Fosmid H28O16, complete sequence | blastn | 10683 | 139 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Rhabditidae | Caenorhabditis | Caenorhabditis elegans | |
| 3298152 | 3298152 | PRJNA770826_P_NODE_503_length_1115_cov_3.984991_g424_i0 | PRJNA770826 | 503 | 1115 | 3.984991 | 44.43264965 | Strongyloides ratti | 34506 | Nematoda | Nematoda | 915 | 0 | NTclustered | gi|1376136641|ref|XM_024648415.1| | 34506 | g424 | i0 | 81.655 | 94.3605381165919 | 1112 | 194 | 99 | 8 | 9 | 1115 | 10 | 1116 | Strongyloides ratti Actin, alpha cardiac muscle 1 (SRAE_1000145800), partial mRNA | blastn | 105212 | 915 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Strongyloididae | Strongyloides | Strongyloides ratti | |
| 4575183 | 4575183 | PRJNA770826_P_NODE_3084_length_494_cov_2.298876_g2914_i0 | PRJNA770826 | 3084 | 494 | 2.298876 | 11.35644744 | Rhabditolaimus sp. 1 VS-2014 | 1538706 | Nematoda | Nematoda | 292 | 2.61e-74 | NTclustered | gi|675118995|gb|KJ877377.1| | 1538706 | g2914 | i0 | 79.475 | 71.3400809716599 | 419 | 80 | 84 | 5 | 1 | 416 | 3 | 418 | Rhabditolaimus sp. 1 VS-2014 strain RSA134 large subunit ribosomal protein 23 (rpl-23) mRNA, partial cds | blastn | 35242 | 292 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Diplogasteridae | Rhabditolaimus | Rhabditolaimus sp. 1 VS-2014 | |
| 8400106 | 8400106 | PRJNA770826_P_NODE_25627_length_168_cov_0.873950_g25456_i0 | PRJNA770826 | 25627 | 168 | 0.87395 | 1.468236 | Bursaphelenchus ussuriensis | 3375378 | Nematoda | Nematoda | 69.4 | 1.4e-7 | NTclustered | gi|2838470513|gb|PQ500562.1| | 3375378 | g25456 | i0 | 75.309 | 20.2083333333333 | 162 | 30 | 90 | 7 | 1 | 152 | 4229 | 4390 | Bursaphelenchus ussuriensis isolate CD4139 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence | blastn | 3395 | 69.4 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Aphelenchoididae | Bursaphelenchus | Bursaphelenchus ussuriensis | |
| 11410544 | 11410544 | PRJNA770826_P_NODE_6109_length_339_cov_1.613793_g5938_i0 | PRJNA770826 | 6109 | 339 | 1.613793 | 5.47075827 | Opisthokonta | 33154 | Nematoda | Nematoda | 54.7 | 0.009 | NTclustered | gi|1831517864|ref|NM_001136422.4| | 6239 | g5938 | i0 | 100 | 0.896755162241888 | 29 | 0 | 9 | 0 | 285 | 313 | 36 | 8 | Caenorhabditis elegans FIP (Fungus-Induced Protein) Related (fipr-2), partial mRNA | blastn | 304 | 54.7 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Rhabditidae | Caenorhabditis | Caenorhabditis elegans | |
| 12226534 | 12226534 | PRJNA770826_P_NODE_12730_length_225_cov_2.971591_g12559_i0 | PRJNA770826 | 12730 | 225 | 2.971591 | 6.68607975 | Caenorhabditis elegans | 6239 | Nematoda | Nematoda | 202 | 1.88e-47 | NTclustered | gi|156481|gb|M23433.1|CELUBIA | 6239 | g12559 | i0 | 83.182 | 150.395555555556 | 220 | 37 | 98 | 0 | 1 | 220 | 2798 | 2579 | C.elegans polyubiquitin (UbiA) gene, complete cds | blastn | 33839 | 202 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Rhabditidae | Caenorhabditis | Caenorhabditis elegans | |
| 17325252 | 17325252 | PRJNA770826_P_NODE_34674_length_165_cov_0.896552_g34503_i0 | PRJNA770826 | 34674 | 165 | 0.896552 | 1.4793108 | Caenorhabditis elegans | 6239 | Nematoda | Nematoda | 67.6 | 4.93e-7 | NTclustered | gi|392889729|ref|NM_001267159.1| | 6239 | g34503 | i0 | 93.478 | 1.39393939393939 | 46 | 1 | 27 | 2 | 61 | 105 | 650 | 606 | Caenorhabditis elegans Guanine nucleotide-binding protein alpha-11 subunit (gpa-11), partial mRNA | blastn | 230 | 67.6 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Rhabditidae | Caenorhabditis | Caenorhabditis elegans | |
| 17784318 | 17784318 | PRJNA770826_P_NODE_14294_length_213_cov_1.573171_g14123_i0 | PRJNA770826 | 14294 | 213 | 1.573171 | 3.35085423 | Pristionchus | 54125 | Nematoda | Nematoda | 110 | 1.1e-19 | NTclustered | gi|150984629|gb|EF634976.1| | 358043 | g14123 | i0 | 89.773 | 34.1830985915493 | 88 | 6 | 40 | 3 | 129 | 213 | 44 | 131 | Pristionchus sp. 6 RS5101 small subunit ribosomal protein 27 (rps-27) mRNA, complete cds | blastn | 7281 | 110 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Neodiplogasteridae | Pristionchus | Pristionchus sp. 6 RS5101 | |
| 18598726 | 18598726 | PRJNA770826_P_NODE_6395_length_330_cov_1.978648_g6224_i0 | PRJNA770826 | 6395 | 330 | 1.978648 | 6.5295384 | Koerneria sp. RS1982 | 358044 | Nematoda | Nematoda | 211 | 4.84e-50 | NTclustered | gi|150982035|gb|EF634606.1| | 358044 | g6224 | i0 | 78.313 | 3.86363636363636 | 332 | 68 | 100 | 4 | 1 | 330 | 374 | 45 | Koerneria sp. RS1982 large subunit ribosomal protein 23 (rpl-23) mRNA, partial cds | blastn | 1275 | 211 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Neodiplogasteridae | Koerneria | Koerneria sp. RS1982 | |
| 18598756 | 18598756 | PRJNA770826_P_NODE_9935_length_256_cov_1.256039_g9764_i0 | PRJNA770826 | 9935 | 256 | 1.256039 | 3.21545984 | Aphelenchoides besseyi | 269767 | Nematoda | Nematoda | 163 | 1.03e-35 | NTclustered | gi|1229082393|gb|KY992856.1| | 269767 | g9764 | i0 | 78.431 | 88.49609375 | 255 | 51 | 99 | 4 | 1 | 253 | 488 | 740 | Aphelenchoides besseyi actin mRNA, partial cds | blastn | 22655 | 163 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Aphelenchoididae | Aphelenchoides | Aphelenchoides besseyi | |
| 21149537 | 21149537 | PRJNA770826_P_NODE_4377_length_412_cov_7.531680_g4206_i0 | PRJNA770826 | 4377 | 412 | 7.53168 | 31.0305216 | Pristionchus hoplostomus | 1355913 | Nematoda | Nematoda | 159 | 2.27e-34 | NTclustered | gi|524845304|gb|KC819362.1| | 1355913 | g4206 | i0 | 79.556 | 5.01456310679612 | 225 | 44 | 54 | 2 | 102 | 325 | 260 | 37 | Pristionchus hoplostomus strain JU1090 subunit ribosomal protein 35 (rpl-35) mRNA, partial cds | blastn | 2066 | 159 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Neodiplogasteridae | Pristionchus | Pristionchus hoplostomus |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;