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contig_metadata

8 rows where analysis = "blastn", bioproject = "PRJNA770826" and tax_phylum = "Microsporidia"

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tax_superkingdom 1

tax_phylum 1

  • Microsporidia · 8 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA770826 · 8 ✖

analysis 1

  • blastn · 8 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
746847 746847 PRJNA770826_P_NODE_18681_length_187_cov_1.601449_g18510_i0 PRJNA770826 18681 187 1.601449 2.99470963 Vavraia culicis 103449 Fungi Fungi 283 5.209999999999999e-72   NTclustered gi|667636757|ref|XR_552273.1| 948595 g18510 i0 94.086 11.9839572192513 186 11 99 0 1 186 549 734 Vavraia culicis subsp. floridensis 28S ribosomal RNA (VCUG_02832), partial rRNA blastn 2241 283 1 Eukaryota Opisthokonta Fungi Microsporidia     Pleistophoridae Vavraia Vavraia culicis
3298054 3298054 PRJNA770826_P_NODE_1583_length_679_cov_2.358730_g1435_i0 PRJNA770826 1583 679 2.35873 16.0157767 Fusasporis stethaprioni 2777717 Fungi Fungi 1072 0   NTclustered gi|1914073495|gb|MW077214.1| 2777717 g1435 i0 95.294 97.2164948453608 680 24 99 6 4 679 506 1181 Fusasporis stethaprioni strain 2018 small subunit ribosomal RNA gene, partial sequence blastn 66010 1072 1 Eukaryota Opisthokonta Fungi Microsporidia     Glugeidae Fusasporis Fusasporis stethaprioni
3298175 3298175 PRJNA770826_P_NODE_7503_length_300_cov_1.247012_g7332_i0 PRJNA770826 7503 300 1.247012 3.741036 Glugea plecoglossi 40978 Fungi Fungi 281 3.27e-71   NTclustered gi|1209747780|gb|KX814862.1| 40978 g7332 i0 89.035 62.4666666666667 228 24 76 1 57 284 1314 1540 Glugea plecoglossi small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 18740 281 1 Eukaryota Opisthokonta Fungi Microsporidia     Glugeidae Glugea Glugea plecoglossi
4575147 4575147 PRJNA770826_P_NODE_20464_length_179_cov_1.200000_g20293_i0 PRJNA770826 20464 179 1.2 2.148 Fusasporis stethaprioni 2777717 Fungi Fungi 233 5.0499999999999995e-57   NTclustered gi|1914073495|gb|MW077214.1| 2777717 g20293 i0 90.449 79.2402234636871 178 16 99 1 1 178 347 523 Fusasporis stethaprioni strain 2018 small subunit ribosomal RNA gene, partial sequence blastn 14184 233 1 Eukaryota Opisthokonta Fungi Microsporidia     Glugeidae Fusasporis Fusasporis stethaprioni
10951075 10951075 PRJNA770826_P_NODE_6669_length_322_cov_2.128205_g6498_i0 PRJNA770826 6669 322 2.128205 6.8528201 Pleistophora mulleri 249366 Fungi Fungi 462 1.18e-125   NTclustered gi|134147422|gb|EF119339.1| 249366 g6498 i0 93.269 30.7639751552795 312 19 96 2 1 310 3240 3551 Pleistophora mulleri 16S ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence blastn 9906 462 1 Eukaryota Opisthokonta Fungi Microsporidia     Pleistophoridae Pleistophora Pleistophora mulleri
12686333 12686333 PRJNA770826_P_NODE_2470_length_554_cov_2.205941_g2303_i0 PRJNA770826 2470 554 2.205941 12.22091314 Heterosporis 157917 Fungi Fungi 416 1.68e-111   NTclustered gi|448278452|gb|KC137548.1| 1289055 g2303 i0 83.368 17.1083032490975 475 54 83 20 1 462 2287 2749 Heterosporis sp. NBDP-2013a isolate MN/WAE small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 9478 416 1 Eukaryota Opisthokonta Fungi Microsporidia     Pleistophoridae Heterosporis Heterosporis sp. NBDP-2013a
17325198 17325198 PRJNA770826_P_NODE_18154_length_190_cov_1.184397_g17983_i0 PRJNA770826 18154 190 1.184397 2.2503543 Pleistophora mulleri 249366 Fungi Fungi 296 6.83e-76   NTclustered gi|134147422|gb|EF119339.1| 249366 g17983 i0 94.764 57.1315789473684 191 8 100 2 1 190 3096 2907 Pleistophora mulleri 16S ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence blastn 10855 296 1 Eukaryota Opisthokonta Fungi Microsporidia     Pleistophoridae Pleistophora Pleistophora mulleri
23699802 23699802 PRJNA770826_P_NODE_15339_length_206_cov_1.324841_g15168_i0 PRJNA770826 15339 206 1.324841 2.72917246 Vavraia culicis 103449 Fungi Fungi 254 4.6e-63   NTclustered gi|667636757|ref|XR_552273.1| 948595 g15168 i0 89.216 1.99029126213592 204 21 99 1 1 204 2367 2569 Vavraia culicis subsp. floridensis 28S ribosomal RNA (VCUG_02832), partial rRNA blastn 410 254 1 Eukaryota Opisthokonta Fungi Microsporidia     Pleistophoridae Vavraia Vavraia culicis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;