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contig_metadata

34 rows where analysis = "blastn", bioproject = "PRJNA770826" and tax_phylum = "Heterolobosea"

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tax_superkingdom 1

tax_phylum 1

  • Heterolobosea · 34 ✖

tax_clade 1

bioproject 1

  • PRJNA770826 · 34 ✖

analysis 1

  • blastn · 34 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
746802 746802 PRJNA770826_P_NODE_11181_length_241_cov_1.083333_g11010_i0 PRJNA770826 11181 241 1.083333 2.61083253 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 388 1.46e-103   NTclustered gi|290998100|ref|XM_002681573.1| 5762 g11010 i0 97.778 0.933609958506224 225 5 93 0 1 225 241 17 Naegleria gruberi 60S acidic ribosomal protein P1 (NAEGRDRAFT_78273), mRNA blastn 225 388 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
2022947 2022947 PRJNA770826_P_NODE_43622_length_162_cov_0.920354_g43451_i0 PRJNA770826 43622 162 0.920354 1.49097348 Naegleria fowleri 5763 Heterolobosea other_Eukaryota 200 4.549999999999998e-47   NTclustered gi|2031932327|emb|OD956661.1| 5763 g43451 i0 88.889 3 162 18 100 0 1 162 10981 11142 Naegleria fowleri Karachi_NF001 strain blastn 486 200 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
2022997 2022997 PRJNA770826_P_NODE_8762_length_274_cov_0.924444_g8591_i0 PRJNA770826 8762 274 0.924444 2.53297656 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 479 9.74e-131   NTclustered gi|290971318|ref|XM_002668414.1| 5762 g8591 i0 98.175 45.9087591240876 274 5 100 0 1 274 641 368 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_61055), partial mRNA blastn 12579 479 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
3298183 3298183 PRJNA770826_P_NODE_8203_length_284_cov_1.306383_g8032_i0 PRJNA770826 8203 284 1.306383 3.71012772 Naegleria jamiesoni 36335 Heterolobosea other_Eukaryota 507 4.66e-139   NTclustered gi|2351573|gb|U80061.1|NJU80061 36335 g8032 i0 98.944 95.7077464788732 284 1 100 2 1 284 74 355 Naegleria jamiesoni 18S ribosomal RNA gene, partial sequence blastn 27181 507 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria jamiesoni
4575218 4575218 PRJNA770826_P_NODE_41164_length_163_cov_0.912281_g40993_i0 PRJNA770826 41164 163 0.912281 1.48701803 Naegleria fowleri 5763 Heterolobosea other_Eukaryota 233 4.52e-57   NTclustered gi|2031951830|emb|OD958699.1| 5763 g40993 i0 92.593 1.98773006134969 162 12 99 0 2 163 2921 2760 Naegleria fowleri Karachi_NF001 strain blastn 324 233 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
4575271 4575271 PRJNA770826_P_NODE_8524_length_278_cov_2.235808_g8353_i0 PRJNA770826 8524 278 2.235808 6.21554624 Acrasis rosea 43695 Heterolobosea other_Eukaryota 156 1.9e-33   NTclustered gi|330413915|gb|HM114339.1| 43695 g8353 i0 82.447 35.8381294964029 188 24 66 9 69 252 1051 1233 Acrasis rosea strain NJ08-1A-1 18S ribosomal RNA gene, partial sequence blastn 9963 156 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis rosea
5850334 5850334 PRJNA770826_P_NODE_10085_length_254_cov_1.497561_g9914_i0 PRJNA770826 10085 254 1.497561 3.80380494 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 165 2.84e-36   NTclustered gi|290983691|ref|XM_002674516.1| 5762 g9914 i0 85.443 18.0905511811024 158 23 62 0 51 208 724 881 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_50877), partial mRNA blastn 4595 165 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
5850390 5850390 PRJNA770826_P_NODE_18585_length_188_cov_1.122302_g18414_i0 PRJNA770826 18585 188 1.122302 2.10992776 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 276 8.780000000000001e-70   NTclustered gi|290984626|ref|XM_002674982.1| 5762 g18414 i0 94.886 3.68617021276596 176 9 94 0 2 177 559 384 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_58587), mRNA blastn 693 276 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
5850474 5850474 PRJNA770826_P_NODE_39705_length_163_cov_0.912281_g39534_i0 PRJNA770826 39705 163 0.912281 1.48701803 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 248 1.61e-61   NTclustered gi|290983946|ref|XM_002674643.1| 5762 g39534 i0 95 0.98159509202454 160 5 98 2 4 163 444 288 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_80517), mRNA blastn 160 248 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
7125554 7125554 PRJNA770826_P_NODE_13646_length_218_cov_1.201183_g13475_i0 PRJNA770826 13646 218 1.201183 2.61857894 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 130 8.650000000000001e-26   NTclustered gi|290975754|ref|XM_002670561.1| 5762 g13475 i0 78.866 1.71559633027523 194 39 89 2 1 193 213 405 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_55912), mRNA blastn 374 130 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
7125642 7125642 PRJNA770826_P_NODE_33926_length_165_cov_0.896552_g33755_i0 PRJNA770826 33926 165 0.896552 1.4793108 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 211 2.15e-50   NTclustered gi|290987344|ref|XM_002676337.1| 5762 g33755 i0 89.697 1 165 17 100 0 1 165 331 167 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_39417), mRNA blastn 165 211 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
9675343 9675343 PRJNA770826_P_NODE_30988_length_166_cov_0.888889_g30817_i0 PRJNA770826 30988 166 0.888889 1.47555574 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 263 5.9e-66   NTclustered gi|290971051|ref|XM_002668309.1| 5762 g30817 i0 95.181 1 166 8 100 0 1 166 213 48 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_76733), partial mRNA blastn 166 263 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
10950930 10950930 PRJNA770826_P_NODE_14549_length_211_cov_1.919753_g14378_i0 PRJNA770826 14549 211 1.919753 4.05067883 Naegleria andersoni 5764 Heterolobosea other_Eukaryota 363 7.539999999999999e-96   NTclustered gi|4321711|gb|AF058284.1|AF058284 5764 g14378 i0 97.63 12.5592417061611 211 5 100 0 1 211 385 595 Naegleria andersoni elongation factor 1 alpha (tef2) gene, partial cds blastn 2650 363 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria andersoni
10950973 10950973 PRJNA770826_P_NODE_22469_length_170_cov_1.404959_g22298_i0 PRJNA770826 22469 170 1.404959 2.3884303 Naegleria jamiesoni 36335 Heterolobosea other_Eukaryota 300 4.6e-77   NTclustered gi|2351573|gb|U80061.1|NJU80061 36335 g22298 i0 98.225 99.0058823529412 169 3 99 0 1 169 1510 1678 Naegleria jamiesoni 18S ribosomal RNA gene, partial sequence blastn 16831 300 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria jamiesoni
12226592 12226592 PRJNA770826_P_NODE_22970_length_169_cov_0.866667_g22799_i0 PRJNA770826 22970 169 0.866667 1.46466723 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 224 2.8299999999999995e-54   NTclustered gi|25986840|gb|AY122634.1| 5762 g22799 i0 90.533 16.8047337278106 169 16 100 0 1 169 1396 1228 Naegleria gruberi strain ATCC 30224 heat shock protein 90 (HSP-90) gene, partial cds blastn 2840 224 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
12226595 12226595 PRJNA770826_P_NODE_23470_length_169_cov_0.866667_g23299_i0 PRJNA770826 23470 169 0.866667 1.46466723 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 63.9 6.52e-6   NTclustered gi|290992455|ref|XM_002678804.1| 5762 g23299 i0 91.304 0.792899408284024 46 4 27 0 124 169 226 271 Naegleria gruberi myo-inositol 1-phosphate synthase (NAEGRDRAFT_36195), mRNA blastn 134 63.9 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
13500645 13500645 PRJNA770826_P_NODE_24891_length_169_cov_0.866667_g24720_i0 PRJNA770826 24891 169 0.866667 1.46466723 Naegleria fowleri 5763 Heterolobosea other_Eukaryota 174 2.89e-39   NTclustered gi|2119422033|ref|XM_044711265.1| 5763 g24720 i0 88.276 1.75739644970414 145 17 86 0 25 169 271 127 Naegleria fowleri uncharacterized protein (FDP41_007511), partial mRNA blastn 297 174 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
13500669 13500669 PRJNA770826_P_NODE_35371_length_165_cov_0.896552_g35200_i0 PRJNA770826 35371 165 0.896552 1.4793108 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 176 7.85e-40   NTclustered gi|290999516|ref|XM_002682280.1| 5762 g35200 i0 92 0.757575757575758 125 10 76 0 41 165 145 269 Naegleria gruberi serine C-palmitoyltransferase (NAEGRDRAFT_82916), mRNA blastn 125 176 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
13500697 13500697 PRJNA770826_P_NODE_41831_length_162_cov_0.920354_g41660_i0 PRJNA770826 41831 162 0.920354 1.49097348 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 204 3.52e-48   NTclustered gi|290984888|ref|XM_002675113.1| 5762 g41660 i0 89.506 2.91358024691358 162 15 99 2 2 162 707 867 Naegleria gruberi coronin (NAEGRDRAFT_56244), mRNA blastn 472 204 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
14775835 14775835 PRJNA770826_P_NODE_37992_length_164_cov_0.904348_g37821_i0 PRJNA770826 37992 164 0.904348 1.48313072 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 265 1.6199999999999998e-66   NTclustered gi|290993491|ref|XM_002679321.1| 5762 g37821 i0 95.732 15.1036585365854 164 7 100 0 1 164 3 166 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_38530), partial mRNA blastn 2477 265 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
16049496 16049496 PRJNA770826_P_NODE_22433_length_170_cov_1.719008_g22262_i0 PRJNA770826 22433 170 1.719008 2.9223136 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 298 1.65e-76   NTclustered gi|9742|emb|X12563.1| 5762 g22262 i0 98.235 72.9117647058823 170 3 100 0 1 170 255 424 Naegleria gruberi gene for alpha-tubulin (3) blastn 12395 298 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
16049529 16049529 PRJNA770826_P_NODE_30653_length_167_cov_0.881356_g30482_i0 PRJNA770826 30653 167 0.881356 1.47186452 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 207 2.83e-49   NTclustered gi|290980495|ref|XM_002672922.1| 5762 g30482 i0 90.909 2.83233532934132 154 14 92 0 14 167 777 624 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_81090), partial mRNA blastn 473 207 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
17325239 17325239 PRJNA770826_P_NODE_28034_length_167_cov_1.491525_g27863_i0 PRJNA770826 28034 167 1.491525 2.49084675 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 246 5.99e-61   NTclustered gi|290973267|ref|XM_002669325.1| 5762 g27863 i0 93.939 1.92215568862275 165 7 99 1 3 167 1111 950 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_82184), mRNA blastn 321 246 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
18598695 18598695 PRJNA770826_P_NODE_3895_length_436_cov_2.142119_g3724_i0 PRJNA770826 3895 436 2.142119 9.33963884 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 372 2.85e-98   NTclustered gi|290973034|ref|XM_002669209.1| 5762 g3724 i0 82.734 92.2637614678899 417 72 96 0 1 417 1520 1104 Naegleria gruberi beta-tubulin (NAEGRDRAFT_83350), mRNA blastn 40227 372 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
21149436 21149436 PRJNA770826_P_NODE_16637_length_198_cov_1.744966_g16466_i0 PRJNA770826 16637 198 1.744966 3.45503268 Naegleria pringsheimi 234921 Heterolobosea other_Eukaryota 348 1.95e-91   NTclustered gi|2515557648|gb|OR045415.1| 234921 g16466 i0 98.477 77.2272727272727 197 3 99 0 1 197 4426 4622 Naegleria pringsheimi strain Singh(s) rDNA-containing extrachromosomal element genomic sequence; 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence; and non-ribosomal sequence blastn 15291 348 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria pringsheimi
21149441 21149441 PRJNA770826_P_NODE_17157_length_195_cov_1.424658_g16986_i0 PRJNA770826 17157 195 1.424658 2.7780831 Naegleria fowleri 5763 Heterolobosea other_Eukaryota 189 1.2299999999999996e-43   NTclustered gi|2119427415|ref|XM_044701330.1| 5763 g16986 i0 84.456 14.4461538461538 193 28 98 2 1 192 795 986 Naegleria fowleri uncharacterized protein (FDP41_010973), partial mRNA blastn 2817 189 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
21149494 21149494 PRJNA770826_P_NODE_28917_length_167_cov_0.881356_g28746_i0 PRJNA770826 28917 167 0.881356 1.47186452 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 222 1.01e-53   NTclustered gi|290983673|ref|XM_002674507.1| 5762 g28746 i0 92.81 3.44910179640719 153 11 92 0 9 161 1104 1256 Naegleria gruberi translation elongation factor 2 (NAEGRDRAFT_56254), mRNA blastn 576 222 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
21149562 21149562 PRJNA770826_P_NODE_657_length_1003_cov_2.641509_g555_i0 PRJNA770826 657 1003 2.641509 26.49433527 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 787 0   NTclustered gi|829212|emb|X81050.1| 5762 g555 i0 83.61 81.3928215353938 842 134 84 3 1 840 511 1350 N.gruberi mRNA for beta-tubulin blastn 81637 787 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
22424150 22424150 PRJNA770826_P_NODE_14778_length_210_cov_0.968944_g14607_i0 PRJNA770826 14778 210 0.968944 2.0347824 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 233 6.13e-57   NTclustered gi|290988856|ref|XM_002677060.1| 5762 g14607 i0 86.957 2.79047619047619 207 27 99 0 4 210 342 136 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_83145), mRNA blastn 586 233 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
22424208 22424208 PRJNA770826_P_NODE_28678_length_167_cov_0.881356_g28507_i0 PRJNA770826 28678 167 0.881356 1.47186452 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 248 1.66e-61   NTclustered gi|290992854|ref|XM_002679003.1| 5762 g28507 i0 93.413 2 167 11 100 0 1 167 278 444 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_36087), mRNA blastn 334 248 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
22424255 22424255 PRJNA770826_P_NODE_42358_length_162_cov_0.920354_g42187_i0 PRJNA770826 42358 162 0.920354 1.49097348 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 193 7.61e-45   NTclustered gi|290973938|ref|XM_002669658.1| 5762 g42187 i0 88.272 1 162 17 99 2 1 161 880 1040 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_82063), mRNA blastn 162 193 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
23699798 23699798 PRJNA770826_P_NODE_1479_length_700_cov_2.414747_g1337_i0 PRJNA770826 1479 700 2.414747 16.903229 Naegleria fowleri 5763 Heterolobosea other_Eukaryota 551 5.649999999999998e-152   NTclustered gi|2031924363|emb|OD955780.1| 5763 g1337 i0 82.742 227.101428571429 620 105 88 2 1 619 1297 1915 Naegleria fowleri Karachi_NF001 strain blastn 158971 551 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
24973438 24973438 PRJNA770826_P_NODE_13160_length_222_cov_1.196532_g12989_i0 PRJNA770826 13160 222 1.196532 2.65630104 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 274 3.86e-69   NTclustered gi|290999450|ref|XM_002682247.1| 5762 g12989 i0 89.815 3.05405405405405 216 18 96 2 1 214 214 1 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_35035), partial mRNA blastn 678 274 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
24973571 24973571 PRJNA770826_P_NODE_42120_length_162_cov_0.920354_g41949_i0 PRJNA770826 42120 162 0.920354 1.49097348 Naegleria fowleri 5763 Heterolobosea other_Eukaryota 176 7.67e-40   NTclustered gi|2031924593|emb|OD955803.1| 5763 g41949 i0 88.356 34.9814814814815 146 17 90 0 3 148 5374 5519 Naegleria fowleri Karachi_NF001 strain blastn 5667 176 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;