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contig_metadata

10 rows where analysis = "blastn", bioproject = "PRJNA770826" and tax_phylum = "Bdellovibrionota"

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tax_superkingdom 1

tax_phylum 1

  • Bdellovibrionota · 10 ✖

tax_kingdom 1

bioproject 1

  • PRJNA770826 · 10 ✖

analysis 1

  • blastn · 10 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3298091 3298091 PRJNA770826_P_NODE_22563_length_170_cov_1.280992_g22392_i0 PRJNA770826 22563 170 1.280992 2.1776864 Pseudobdellovibrio sp. HCB154 3386277 Bacteria Bacteria 86.1 1.4e-12   NTclustered gi|2872995934|gb|CP176530.1| 3386277 g22392 i0 90.769 17.4529411764706 65 4 38 2 102 166 1059851 1059913 Pseudobdellovibrio sp. HCB154 chromosome, complete genome blastn 2967 86.1 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae Pseudobdellovibrio Pseudobdellovibrio sp. HCB154
8400070 8400070 PRJNA770826_P_NODE_18527_length_188_cov_1.316547_g18356_i0 PRJNA770826 18527 188 1.316547 2.47510836 Bdellovibrio sp. qaytius 1916293 Bacteria Bacteria 207 3.25e-49   NTclustered gi|1552089877|gb|CP025734.1| 1916293 g18356 i0 86.702 210.648936170213 188 23 100 2 1 188 666552 666737 Bdellovibrio sp. qaytius chromosome, complete genome blastn 39602 207 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae Bdellovibrio Bdellovibrio sp. qaytius
12226517 12226517 PRJNA770826_P_NODE_10710_length_246_cov_1.898477_g10539_i0 PRJNA770826 10710 246 1.898477 4.67025342 uncultured Bdellovibrio sp. 239744 Bacteria Bacteria 449 6.74e-122   NTclustered gi|1685832116|gb|MN072842.1| 239744 g10539 i0 99.593 99.8455284552846 246 1 100 0 1 246 378 133 Uncultured Bdellovibrio sp. clone OTU266 16S ribosomal RNA gene, partial sequence blastn 24562 449 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae Bdellovibrio uncultured Bdellovibrio sp.
12226570 12226570 PRJNA770826_P_NODE_19130_length_185_cov_1.323529_g18959_i0 PRJNA770826 19130 185 1.323529 2.44852865 Pseudobdellovibrio sp. HCB154 3386277 Bacteria Bacteria 298 1.84e-76   NTclustered gi|2872995934|gb|CP176530.1| 3386277 g18959 i0 95.676 209.643243243243 185 8 100 0 1 185 701730 701546 Pseudobdellovibrio sp. HCB154 chromosome, complete genome blastn 38784 298 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae Pseudobdellovibrio Pseudobdellovibrio sp. HCB154
12226693 12226693 PRJNA770826_P_NODE_8350_length_281_cov_1.590517_g8179_i0 PRJNA770826 8350 281 1.590517 4.46935277 Bdellovibrio sp. qaytius 1916293 Bacteria Bacteria 315 2.99e-81   NTclustered gi|1552089877|gb|CP025734.1| 1916293 g8179 i0 87.189 310.978647686833 281 31 100 3 1 281 666503 666778 Bdellovibrio sp. qaytius chromosome, complete genome blastn 87385 315 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae Bdellovibrio Bdellovibrio sp. qaytius
16509651 16509651 PRJNA770826_P_NODE_6933_length_315_cov_0.819549_g6762_i0 PRJNA770826 6933 315 0.819549 2.58157935 Bdellovibrio 958 Bacteria Bacteria 320 7.32e-83   NTclustered gi|2800948966|gb|CP168973.1| 959 g6762 i0 90.283 162.501587301587 247 20 77 3 63 306 815808 816053 Bdellovibrio bacteriovorus strain HK2 chromosome, complete genome blastn 51188 322 0.993788819875776 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae Bdellovibrio Bdellovibrio bacteriovorus
18598722 18598722 PRJNA770826_P_NODE_5755_length_351_cov_1.956954_g5584_i0 PRJNA770826 5755 351 1.956954 6.86890854 Pseudobdellovibrionaceae bacterium 2026715 Bacteria Bacteria 346 1.3599999999999999e-90   NTclustered gi|2258818259|gb|CP060220.1| 2026715 g5584 i0 87.879 118.717948717949 297 32 84 4 7 301 3250630 3250924 MAG: Pseudobdellovibrionaceae bacterium isolate HK-STAS-BDEL-7 chromosome blastn 41670 346 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae   Pseudobdellovibrionaceae bacterium
19873710 19873710 PRJNA770826_P_NODE_38176_length_164_cov_0.904348_g38005_i0 PRJNA770826 38176 164 0.904348 1.48313072 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 110 8.01e-20   NTclustered gi|2626289182|emb|OY843585.1| 2053517 g38005 i0 81.818 0.804878048780488 132 22 80 2 4 134 1095886 1095756 MAG: Bdellovibrionales bacterium isolate 022bb5af-5c53-4953-82b0-2ef8059d9f16 genome assembly, chromosome: 1 blastn 132 110 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
22424183 22424183 PRJNA770826_P_NODE_20358_length_179_cov_1.600000_g20187_i0 PRJNA770826 20358 179 1.6 2.864 Pseudobdellovibrio sp. HCB154 3386277 Bacteria Bacteria 322 1.05e-83   NTclustered gi|2872995934|gb|CP176530.1| 3386277 g20187 i0 100 167.234636871508 174 0 97 0 1 174 699719 699892 Pseudobdellovibrio sp. HCB154 chromosome, complete genome blastn 29935 322 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae Pseudobdellovibrio Pseudobdellovibrio sp. HCB154
24973554 24973554 PRJNA770826_P_NODE_36560_length_164_cov_0.904348_g36389_i0 PRJNA770826 36560 164 0.904348 1.48313072 Bdellovibrio sp. HCB337 3394358 Bacteria Bacteria 259 7.52e-65   NTclustered gi|2895525383|gb|CP178621.1| 3394358 g36389 i0 95.122 142.243902439024 164 8 100 0 1 164 3447795 3447632 Bdellovibrio sp. HCB337 chromosome, complete genome blastn 23328 259 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae Bdellovibrio Bdellovibrio sp. HCB337

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;