RNAquarium Metadata Server
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contig_metadata

7 rows where analysis = "blastn", bioproject = "PRJNA770826" and tax_phylum = "Acidobacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Acidobacteriota · 7 ✖

tax_kingdom 1

bioproject 1

  • PRJNA770826 · 7 ✖

analysis 1

  • blastn · 7 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3298151 3298151 PRJNA770826_P_NODE_4903_length_385_cov_2.741071_g4732_i0 PRJNA770826 4903 385 2.741071 10.55312335 uncultured Acidobacteriota bacterium 171953 Bacteria Bacteria 628 1.33e-175   NTclustered gi|2874253692|emb|OY969418.1| 171953 g4732 i0 96.335 93.425974025974 382 14 99 0 4 385 4232657 4233038 MAG: uncultured Acidobacteriota bacterium isolate MFD09212.bin.c.1 genome assembly, chromosome: 1 blastn 35969 628 1 Bacteria   Pseudomonadati Acidobacteriota         uncultured Acidobacteriota bacterium
8400050 8400050 PRJNA770826_P_NODE_14667_length_211_cov_0.962963_g14496_i0 PRJNA770826 14667 211 0.962963 2.03185193 uncultured Acidobacteriota bacterium 171953 Bacteria Bacteria 307 3.5800000000000004e-79   NTclustered gi|2874253692|emb|OY969418.1| 171953 g14496 i0 92.925 141.132701421801 212 14 100 1 1 211 4233748 4233959 MAG: uncultured Acidobacteriota bacterium isolate MFD09212.bin.c.1 genome assembly, chromosome: 1 blastn 29779 307 1 Bacteria   Pseudomonadati Acidobacteriota         uncultured Acidobacteriota bacterium
12226586 12226586 PRJNA770826_P_NODE_21770_length_173_cov_1.258065_g21599_i0 PRJNA770826 21770 173 1.258065 2.17645245 Edaphobacter sp. 4G125 2763071 Bacteria Bacteria 71.3 4.01e-8   NTclustered gi|1895667655|gb|CP060393.1| 2763071 g21599 i0 88.333 0.346820809248555 60 6 35 1 96 155 3147482 3147540 Edaphobacter sp. 4G125 chromosome, complete genome blastn 60 71.3 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae Edaphobacter Edaphobacter sp. 4G125
13500667 13500667 PRJNA770826_P_NODE_3491_length_463_cov_1.188406_g3320_i0 PRJNA770826 3491 463 1.188406 5.50231978 Acidobacteriota bacterium 1978231 Bacteria Bacteria 392 2.33e-104   NTclustered gi|1958098837|gb|CP065005.1| 1978231 g3320 i0 86.517 73.9330453563715 356 48 77 0 108 463 4648996 4648641 Acidobacteria bacterium isolate Kalu_18-Q3-R12-55_MAXAC.198_cln chromosome, complete genome blastn 34231 392 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
18598735 18598735 PRJNA770826_P_NODE_7735_length_294_cov_1.273469_g7564_i0 PRJNA770826 7735 294 1.273469 3.74399886 uncultured Acidobacteriota bacterium 171953 Bacteria Bacteria 344 4.02e-90   NTclustered gi|2874253692|emb|OY969418.1| 171953 g7564 i0 87.879 974.268707482993 297 31 100 5 1 294 4233950 4233656 MAG: uncultured Acidobacteriota bacterium isolate MFD09212.bin.c.1 genome assembly, chromosome: 1 blastn 286435 344 1 Bacteria   Pseudomonadati Acidobacteriota         uncultured Acidobacteriota bacterium
21149513 21149513 PRJNA770826_P_NODE_34177_length_165_cov_0.896552_g34006_i0 PRJNA770826 34177 165 0.896552 1.4793108 Paludibaculum fermentans 1473598 Bacteria Bacteria 126 8.02e-25   NTclustered gi|1929489624|gb|CP063849.1| 1473598 g34006 i0 81.699 47.1030303030303 153 26 92 2 4 155 2258353 2258504 Paludibaculum fermentans strain P105 chromosome, complete genome blastn 7772 126 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales Bryobacteraceae Paludibaculum Paludibaculum fermentans
24973465 24973465 PRJNA770826_P_NODE_16200_length_201_cov_1.223684_g16029_i0 PRJNA770826 16200 201 1.223684 2.45960484 Thermoanaerobaculia bacterium 2651171 Bacteria Bacteria 174 3.58e-39   NTclustered gi|2893358450|emb|OZ220742.1| 2651171 g16029 i0 83.784 10.8905472636816 185 28 92 2 10 193 3404922 3404739 MAG: Thermoanaerobaculia bacterium isolate 0db66e92-d31a-4200-8262-fff8455c21c0 genome assembly, chromosome: 1 blastn 2189 174 1 Bacteria   Pseudomonadati Acidobacteriota Thermoanaerobaculia       Thermoanaerobaculia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;