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contig_metadata

26 rows where analysis = "blastn", bioproject = "PRJNA770826" and tax_clade = "core chlorophytes"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • core chlorophytes · 26 ✖

bioproject 1

  • PRJNA770826 · 26 ✖

analysis 1

  • blastn · 26 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
746911 746911 PRJNA770826_P_NODE_36261_length_164_cov_1.356522_g36090_i0 PRJNA770826 36261 164 1.356522 2.22469608 Coccomyxa subellipsoidea 248742 Plants Plants 110 8.01e-20   NTclustered gi|545372066|ref|XM_005650481.1| 574566 g36090 i0 84.211 0.695121951219512 114 16 69 2 1 113 657 545 Coccomyxa subellipsoidea C-169 terpenoid cyclases/Protein prenyltransferase partial mRNA blastn 114 110 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa subellipsoidea
3298148 3298148 PRJNA770826_P_NODE_4683_length_397_cov_31.333333_g4512_i0 PRJNA770826 4683 397 31.333333 124.39333201 Desmochloris halophila 138176 Plants Plants 621 2.3099999999999996e-173   NTclustered gi|371782086|emb|HE610118.1| 138176 g4512 i0 97.275 84.5541561712846 367 9 92 1 1 366 3642 4008 Desmochloris halophila 18S rRNA gene (partial), 5.8S rRNA gene, 28S rRNA gene (partial), ITS1 and ITS2, strain UTEX 2073 blastn 33568 621 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Ulvophyceae Chlorocystidales Chlorocystidaceae Desmochloris Desmochloris halophila
4575188 4575188 PRJNA770826_P_NODE_324_length_1312_cov_9.991291_g266_i0 PRJNA770826 324 1312 9.991291 131.08573792 Desmochloris halophila 138176 Plants Plants 2174 0   NTclustered gi|371782123|emb|HE610155.1| 138176 g266 i0 96.581 116.829268292683 1316 37 100 5 1 1312 2679 3990 Desmochloris halophila plastid 16S rRNA gene (partial), 23S rRNA gene (partial) and ITS1, strain UTEX 2073 blastn 153280 2174 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Ulvophyceae Chlorocystidales Chlorocystidaceae Desmochloris Desmochloris halophila
4575239 4575239 PRJNA770826_P_NODE_544_length_1082_cov_6.066796_g459_i0 PRJNA770826 544 1082 6.066796 65.64273272 Desmochloris halophila 138176 Plants Plants 1358 0   NTclustered gi|371782123|emb|HE610155.1| 138176 g459 i0 96.062 104.306839186691 838 25 77 4 244 1081 1753 2582 Desmochloris halophila plastid 16S rRNA gene (partial), 23S rRNA gene (partial) and ITS1, strain UTEX 2073 blastn 112860 1358 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Ulvophyceae Chlorocystidales Chlorocystidaceae Desmochloris Desmochloris halophila
5035066 5035066 PRJNA770826_P_NODE_7284_length_305_cov_15.699219_g7113_i0 PRJNA770826 7284 305 15.699219 47.88261795 Desmochloris 138596 Plants Plants 564 2.95e-156   NTclustered gi|313476264|emb|FM882217.1| 578869 g7113 i0 100 100.029508196721 305 0 100 0 1 305 69 373 Desmochloris sp. TP-2008 partial 18S rRNA gene, ITS1, 5.8S rRNA and ITS2, strain CCAP 6006/2 blastn 30509 564 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Ulvophyceae Chlorocystidales Chlorocystidaceae Desmochloris Desmochloris mollenhaueri
7125644 7125644 PRJNA770826_P_NODE_34446_length_165_cov_0.896552_g34275_i0 PRJNA770826 34446 165 0.896552 1.4793108 Chlamydomonas reinhardtii 3055 Plants Plants 84.2 4.89e-12   NTclustered gi|14970741|emb|AJ304836.1| 3055 g34275 i0 88.571 3.81818181818182 70 6 42 2 1 69 1624 1692 Chlamydomonas reinhardtii mRNA for proton-translocating inorganic pyrophosphatase (vppa gene) blastn 630 84.2 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
7125729 7125729 PRJNA770826_P_NODE_9866_length_257_cov_1.250000_g9695_i0 PRJNA770826 9866 257 1.25 3.2125 Chlamydomonas reinhardtii 3055 Plants Plants 278 3.54e-70   NTclustered gi|224593220|gb|FJ715708.1| 3055 g9695 i0 86.275 45.3190661478599 255 35 99 0 3 257 13 267 Chlamydomonas reinhardtii strain CC1690 translation elongation factor-like protein mRNA, partial cds blastn 11647 278 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
9675273 9675273 PRJNA770826_P_NODE_13828_length_217_cov_0.922619_g13657_i0 PRJNA770826 13828 217 0.922619 2.00208323 Auxenochlorella protothecoides 3075 Plants Plants 230 8.25e-56   NTclustered gi|760443472|ref|XM_011400503.1| 3075 g13657 i0 88.77 78.5437788018433 187 21 86 0 1 187 3173 3359 Auxenochlorella protothecoides Pyrophosphate-energized vacuolar membrane proton pump 1 partial mRNA blastn 17044 230 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Auxenochlorella Auxenochlorella protothecoides
9675352 9675352 PRJNA770826_P_NODE_34188_length_165_cov_0.896552_g34017_i0 PRJNA770826 34188 165 0.896552 1.4793108 Coccomyxa subellipsoidea 248742 Plants Plants 126 8.02e-25   NTclustered gi|545366874|ref|XM_005648251.1| 574566 g34017 i0 84.375 11.4484848484848 128 20 78 0 28 155 243 116 Coccomyxa subellipsoidea C-169 EF-hand mRNA blastn 1889 126 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa subellipsoidea
11410547 11410547 PRJNA770826_P_NODE_9109_length_268_cov_2.013699_g8938_i0 PRJNA770826 9109 268 2.013699 5.39671332 Ulvales 3113 Plants Plants 333 7.82e-87   NTclustered gi|2127885487|ref|NC_058886.1| 3116 g8938 i0 89.961 40.7126865671642 259 24 96 2 2 259 30432 30175 Ulva intestinalis isolate CNS000531 mitochondrion, complete genome blastn 10911 333 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Ulvophyceae Ulvales Ulvaceae Ulva Ulva intestinalis
13500660 13500660 PRJNA770826_P_NODE_31231_length_166_cov_0.888889_g31060_i0 PRJNA770826 31231 166 0.888889 1.47555574 Chlorella variabilis 554065 Plants Plants 75 2.97e-9   NTclustered gi|552845489|ref|XM_005851303.1| 554065 g31060 i0 85.526 0.632530120481928 76 5 44 4 38 110 341 269 Chlorella variabilis hypothetical protein (CHLNCDRAFT_18857) mRNA, partial cds blastn 105 75 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella variabilis
13500670 13500670 PRJNA770826_P_NODE_3551_length_458_cov_1.244499_g3380_i0 PRJNA770826 3551 458 1.244499 5.69980542 Auxenochlorella protothecoides 3075 Plants Plants 272 3.1299999999999996e-68   NTclustered gi|760440110|ref|XM_011398822.1| 3075 g3380 i0 80.585 30.2227074235808 376 53 80 17 43 408 411 46 Auxenochlorella protothecoides 60S ribosomal protein L11-1 partial mRNA blastn 13842 272 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Auxenochlorella Auxenochlorella protothecoides
13500725 13500725 PRJNA770826_P_NODE_5811_length_349_cov_1.386667_g5640_i0 PRJNA770826 5811 349 1.386667 4.83946783 Chlamydomonas reinhardtii 3055 Plants Plants 267 1.08e-66   NTclustered gi|2082263148|ref|XM_001693658.2| 3055 g5640 i0 80.516 2.01432664756447 349 66 99 2 2 349 687 340 Chlamydomonas reinhardtii ribosomal protein S3a (CHLRE_13g568650v5), mRNA blastn 703 267 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
14775845 14775845 PRJNA770826_P_NODE_4152_length_423_cov_6.609626_g3981_i0 PRJNA770826 4152 423 6.609626 27.95871798 Monoraphidium neglectum 145388 Plants Plants 63.9 1.88e-5   NTclustered gi|926791790|ref|XM_014048915.1| 145388 g3981 i0 82.667 0.914893617021277 75 10 17 2 237 308 1186 1112 Monoraphidium neglectum WD repeat, SAM and U-box domain-containing protein 1 mRNA blastn 387 63.9 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Selenastraceae Monoraphidium Monoraphidium neglectum
16049451 16049451 PRJNA770826_P_NODE_14993_length_208_cov_16.761006_g14822_i0 PRJNA770826 14993 208 16.761006 34.86289248 Desmochloris halophila 138176 Plants Plants 368 1.59e-97   NTclustered gi|371782086|emb|HE610118.1| 138176 g14822 i0 98.558 100.3125 208 3 100 0 1 208 2812 2605 Desmochloris halophila 18S rRNA gene (partial), 5.8S rRNA gene, 28S rRNA gene (partial), ITS1 and ITS2, strain UTEX 2073 blastn 20865 368 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Ulvophyceae Chlorocystidales Chlorocystidaceae Desmochloris Desmochloris halophila
16049465 16049465 PRJNA770826_P_NODE_16813_length_197_cov_1.405405_g16642_i0 PRJNA770826 16813 197 1.405405 2.76864785 Chlamydomonas reinhardtii 3055 Plants Plants 54.7 0.005   NTclustered gi|2082252906|ref|XM_043065179.1| 3055 g16642 i0 100 0.147208121827411 29 0 15 0 91 119 2391 2363 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_08g376400v5), mRNA blastn 29 54.7 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
16049488 16049488 PRJNA770826_P_NODE_20973_length_177_cov_1.125000_g20802_i0 PRJNA770826 20973 177 1.125 1.99125 Percursaria percursa 153906 Plants Plants 189 1.0899999999999999e-43   NTclustered gi|2112329422|gb|MZ911851.1| 153906 g20802 i0 95.726 24.4689265536723 117 5 66 0 1 117 30454 30570 Percursaria percursa mitochondrion, complete genome blastn 4331 189 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Ulvophyceae Ulvales Kornmanniaceae Percursaria Percursaria percursa
16049594 16049594 PRJNA770826_P_NODE_7813_length_292_cov_1.991770_g7642_i0 PRJNA770826 7813 292 1.99177 5.8159684 Chlamydomonas incerta 51695 Plants Plants 204 7.06e-48   NTclustered gi|74272674|gb|DQ122902.1| 51695 g7642 i0 81.275 12.0445205479452 251 47 86 0 2 252 184 434 Chlamydomonas incerta microtubule-associated protein-related protein mRNA, complete cds blastn 3517 204 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas incerta
17325199 17325199 PRJNA770826_P_NODE_18294_length_189_cov_1.485714_g18123_i0 PRJNA770826 18294 189 1.485714 2.80799946 Trebouxia sp. SL0000003 3350044 Plants Plants 56.5 0.001   NTclustered gi|2917929695|emb|OZ234922.1| 3350044 g18123 i0 96.97 0.174603174603175 33 1 17 0 98 130 1881616 1881648 Trebouxia sp. SL0000003 genome assembly, chromosome: 17 blastn 33 56.5 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia sp. SL0000003
19873620 19873620 PRJNA770826_P_NODE_13816_length_217_cov_0.928571_g13645_i0 PRJNA770826 13816 217 0.928571 2.01499907 Codium fragile 3133 Plants Plants 91.6 4.06e-14   NTclustered gi|1847694119|ref|NC_048526.1| 3133 g13645 i0 88.312 26.6774193548387 77 8 35 1 1 76 40535 40611 Codium fragile mitochondrion, complete genome blastn 5789 91.6 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Ulvophyceae Bryopsidales Codiaceae Codium Codium fragile
20333124 20333124 PRJNA770826_P_NODE_15816_length_203_cov_1.350649_g15645_i0 PRJNA770826 15816 203 1.350649 2.74181747 Chlamydomonas 3052 Plants Plants 147 7.89e-31   NTclustered gi|18144|emb|X53574.1| 3055 g15645 i0 80.978 12.5960591133005 184 35 91 0 20 203 642 825 C. reinhardtii Cblp gene for a G protein beta subunit-like polypeptide blastn 2557 147 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
22424207 22424207 PRJNA770826_P_NODE_28198_length_167_cov_1.135593_g28027_i0 PRJNA770826 28198 167 1.135593 1.89644031 Monoraphidium neglectum 145388 Plants Plants 182 1.71e-41   NTclustered gi|926789258|ref|XM_014047649.1| 145388 g28027 i0 87.342 11.3413173652695 158 20 95 0 1 158 1184 1027 Monoraphidium neglectum F-type H+-transporting ATPase subunit beta mRNA blastn 1894 182 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Selenastraceae Monoraphidium Monoraphidium neglectum
23699779 23699779 PRJNA770826_P_NODE_12119_length_231_cov_1.686813_g11948_i0 PRJNA770826 12119 231 1.686813 3.89653803 Desmochloris mollenhaueri 578869 Plants Plants 333 6.579999999999999e-87   NTclustered gi|1998557696|gb|MW714130.1| 578869 g11948 i0 93.133 69.9523809523809 233 6 99 6 1 230 1994 2219 Desmochloris mollenhaueri strain CCAP 6006/8 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 16159 333 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Ulvophyceae Chlorocystidales Chlorocystidaceae Desmochloris Desmochloris mollenhaueri
23699799 23699799 PRJNA770826_P_NODE_15039_length_208_cov_1.308176_g14868_i0 PRJNA770826 15039 208 1.308176 2.72100608 Asterochloris sp. CNOR1 3094912 Plants Plants 126 1.06e-24   NTclustered gi|2686835491|emb|OZ017764.1| 3094912 g14868 i0 92.135 80.1875 89 7 43 0 3 91 12750 12662 Asterochloris sp. CNOR1 genome assembly, organelle: mitochondrion blastn 16679 126 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Asterochloris Asterochloris sp. CNOR1
23699845 23699845 PRJNA770826_P_NODE_20839_length_177_cov_1.578125_g20668_i0 PRJNA770826 20839 177 1.578125 2.79328125 Coccomyxa subellipsoidea 248742 Plants Plants 121 4.039999999999999e-23   NTclustered gi|545374542|ref|XM_005651492.1| 574566 g20668 i0 80.357 80.1920903954802 168 25 93 8 1 164 297 134 Coccomyxa subellipsoidea C-169 hypothetical protein mRNA blastn 14194 121 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa subellipsoidea
24158349 24158349 PRJNA770826_P_NODE_13459_length_219_cov_1.835294_g13288_i0 PRJNA770826 13459 219 1.835294 4.01929386 Ulvophyceae 33103 Plants Plants 355 1.32e-93   NTclustered gi|1197510977|ref|NC_034710.1| 44573 g13288 i0 95.89 120.643835616438 219 9 100 0 1 219 100197 99979 Pseudoneochloris marina culture UTEX:1445 chloroplast, complete genome blastn 26421 355 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Ulvophyceae Sykidiales Sykidiacaeae Sykidion Sykidion marinum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;