RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA770826" and tax_clade = "Bacteria candidate phyla"

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tax_superkingdom 1

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA770826 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8400132 8400132 PRJNA770826_P_NODE_34767_length_165_cov_0.896552_g34596_i0 PRJNA770826 34767 165 0.896552 1.4793108 Candidatus Sungiibacteriota bacterium 2750080 Bacteria Bacteria 56.5 0.001   NTclustered gi|1950816313|gb|CP066690.1| 2750080 g34596 i0 100 3.73939393939394 30 0 18 0 1 30 188973 188944 MAG: Candidatus Sungiibacteriota bacterium isolate NC_groundwater_541_Ag_S-0.1um_46_50 chromosome blastn 617 56.5 1 Bacteria Bacteria candidate phyla   Candidatus Sungiibacteriota         Candidatus Sungiibacteriota bacterium
16049553 16049553 PRJNA770826_P_NODE_3993_length_431_cov_2.157068_g3822_i0 PRJNA770826 3993 431 2.157068 9.29696308 Candidatus Ozemobacteraceae bacterium 2818468 Bacteria Bacteria 54.7 0.012   NTclustered gi|2907625676|emb|OZ223236.1| 2818468 g3822 i0 96.875 0.074245939675174 32 1 7 0 166 197 270493 270462 MAG: Candidatus Ozemobacteraceae bacterium isolate 4ee0fdf2-fbb4-4151-bfa0-813162405533 genome assembly, chromosome: 2 blastn 32 54.7 1 Bacteria Bacteria candidate phyla     Candidatus Ozemobacteria   Candidatus Ozemobacteraceae   Candidatus Ozemobacteraceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;