RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA770361" and tax_phylum = "Evosea"

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tax_superkingdom 1

tax_phylum 1

  • Evosea · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA770361 · 3 ✖

analysis 1

  • blastn · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5849829 5849829 PRJNA770361_P_NODE_15465_length_249_cov_0.886364_g15370_i0 PRJNA770361 15465 249 0.886364 2.20704636 Heterostelium album 2086695 Evosea other_Eukaryota 252 2.07e-62   NTclustered gi|1160555578|ref|XM_020573614.1| 670386 g15370 i0 85.081 98.0562248995984 248 36 99 1 2 249 805 559 Polysphondylium pallidum PN500 actin partial mRNA blastn 24416 252 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Heterostelium Heterostelium album
9674732 9674732 PRJNA770361_P_NODE_14228_length_252_cov_0.871508_g14133_i0 PRJNA770361 14228 252 0.871508 2.19620016 Entamoeba invadens 33085 Evosea other_Eukaryota 52.8 0.023   NTclustered gi|471207746|ref|XM_004260429.1| 370355 g14133 i0 100 0.111111111111111 28 0 11 0 155 182 406 433 Entamoeba invadens IP1 hypothetical protein (EIN_432580) mRNA, complete cds blastn 28 52.8 1 Eukaryota Amoebozoa   Evosea   Mastigamoebida Entamoebidae Entamoeba Entamoeba invadens
13500196 13500196 PRJNA770361_P_NODE_5271_length_410_cov_1.824926_g5176_i0 PRJNA770361 5271 410 1.824926 7.4821966 Badhamia melanospora 1346252 Evosea other_Eukaryota 289 2.7599999999999996e-73   NTclustered gi|2440757455|gb|OP616491.1| 1346252 g5176 i0 80.811 83.880487804878 370 69 90 2 41 409 44 412 Badhamia melanospora voucher LE318160 translation elongation factor 1-alpha (EF1A) gene, partial cds blastn 34391 289 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Physaraceae Badhamia Badhamia melanospora

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;