RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA770361" and tax_phylum = "Chloroflexota"

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tax_superkingdom 1

tax_phylum 1

  • Chloroflexota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA770361 · 3 ✖

analysis 1

  • blastn · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4574679 4574679 PRJNA770361_P_NODE_18484_length_243_cov_0.917647_g18389_i0 PRJNA770361 18484 243 0.917647 2.22988221 uncultured Chloroflexia bacterium 1672391 Bacteria Bacteria 139 1.63e-28   NTclustered gi|2874253788|emb|OY969772.1| 1672391 g18389 i0 78.673 0.868312757201646 211 43 86 2 21 230 224868 225077 MAG: uncultured Chloroflexia bacterium isolate MFD02416.bin.2.42 genome assembly, chromosome: 1 blastn 211 139 1 Bacteria   Bacillati Chloroflexota Chloroflexia       uncultured Chloroflexia bacterium
10950575 10950575 PRJNA770361_P_NODE_8249_length_327_cov_2.685039_g8154_i0 PRJNA770361 8249 327 2.685039 8.78007753 uncultured Chloroflexia bacterium 1672391 Bacteria Bacteria 152 2.9499999999999997e-32   NTclustered gi|2874253788|emb|OY969772.1| 1672391 g8154 i0 91.743 1.63914373088685 109 9 33 0 219 327 4622332 4622224 MAG: uncultured Chloroflexia bacterium isolate MFD02416.bin.2.42 genome assembly, chromosome: 1 blastn 536 152 1 Bacteria   Bacillati Chloroflexota Chloroflexia       uncultured Chloroflexia bacterium
21148925 21148925 PRJNA770361_P_NODE_16197_length_248_cov_0.891429_g16102_i0 PRJNA770361 16197 248 0.891429 2.21074392 Chloroflexota bacterium 2026724 Bacteria Bacteria 106 1.7e-18   NTclustered gi|1985684846|gb|CP069394.1| 2026724 g16102 i0 88.764 1.70564516129032 89 6 35 4 160 245 4802 4889 Chloroflexi bacterium strain ZRK35 chromosome, complete genome blastn 423 106 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;