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contig_metadata

9 rows where analysis = "blastn", bioproject = "PRJNA770361" and tax_phylum = "Apicomplexa"

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tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 9 ✖

tax_clade 1

bioproject 1

  • PRJNA770361 · 9 ✖

analysis 1

  • blastn · 9 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
746402 746402 PRJNA770361_P_NODE_3061_length_539_cov_1.673820_g2967_i0 PRJNA770361 3061 539 1.67382 9.0218898 Toxoplasma gondii 5811 SAR_Eukaryotes SAR_Eukaryotes 420 1.2599999999999995e-112   NTclustered gi|820697789|tpe|LN714496.1| 432359 g2967 i0 81.404 77.734693877551 527 86 97 10 1 521 1371653 1372173 TPA_asm: Toxoplasma gondii VEG, chromosome chrVIIa, complete genome blastn 41899 420 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Toxoplasma Toxoplasma gondii
746446 746446 PRJNA770361_P_NODE_561_length_1202_cov_3.062002_g514_i0 PRJNA770361 561 1202 3.062002 36.80526404 Neospora caninum 29176 SAR_Eukaryotes SAR_Eukaryotes 896 0   NTclustered gi|401412092|ref|XM_003885445.1| 572307 g514 i0 80.183 97.1455906821963 1201 234 99 4 2 1200 13 1211 Neospora caninum Liverpool tubulin alpha chain (NCLIV_058890), partial mRNA blastn 116769 896 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Neospora Neospora caninum
5849817 5849817 PRJNA770361_P_NODE_1485_length_768_cov_3.520863_g1397_i0 PRJNA770361 1485 768 3.520863 27.04022784 Neospora caninum 29176 SAR_Eukaryotes SAR_Eukaryotes 270 1.95e-67   NTclustered gi|820688590|tpe|LN714475.1| 572307 g1397 i0 87.826 28.5455729166667 230 28 30 0 538 767 951293 951064 TPA_asm: Neospora caninum Liverpool, chromosome chrIb, complete genome blastn 21923 270 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Neospora Neospora caninum
6310452 6310452 PRJNA770361_P_NODE_325_length_1466_cov_9.092606_g299_i0 PRJNA770361 325 1466 9.092606 133.29760396 Toxoplasma 5810 SAR_Eukaryotes SAR_Eukaryotes 867 0   NTclustered gi|260323703|dbj|AK317816.1| 5811 g299 i0 78.629 49.9365620736698 1357 255 91 27 6 1346 1568 231 Toxoplasma gondii cDNA, clone: XTG00910.2, full cDNA, XTG Sugano cDNA library blastn 73207 867 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Toxoplasma Toxoplasma gondii
8399457 8399457 PRJNA770361_P_NODE_12107_length_270_cov_1.187817_g12012_i0 PRJNA770361 12107 270 1.187817 3.2071059 Cyclospora cayetanensis 88456 SAR_Eukaryotes SAR_Eukaryotes 84.2 8.78e-12   NTclustered gi|1249165227|ref|XM_022730797.1| 88456 g12012 i0 85.185 0.3 81 12 30 0 12 92 290 370 PREDICTED: Cyclospora cayetanensis late histone H2B.L4 (LOC34617424), mRNA blastn 81 84.2 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Cyclospora Cyclospora cayetanensis
8859549 8859549 PRJNA770361_P_NODE_6287_length_374_cov_1.036545_g6192_i0 PRJNA770361 6287 374 1.036545 3.8766783 Eimeria 5800 SAR_Eukaryotes SAR_Eukaryotes 63.9 1.64e-5   NTclustered gi|916428551|ref|XM_013380051.1| 5802 g6192 i0 97.368 23.457219251336895 38 0 10 1 136 173 249 213 Eimeria tenella uncharacterized protein (ETH_00035845), partial mRNA blastn 8773 63.9 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria tenella
12226170 12226170 PRJNA770361_P_NODE_6550_length_366_cov_1.672355_g6455_i0 PRJNA770361 6550 366 1.672355 6.1208193 Plasmodium relictum 85471 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.035   NTclustered gi|1620141828|ref|XM_028676858.1| 85471 g6455 i0 100 0.0765027322404372 28 0 8 0 77 104 1365 1392 Plasmodium relictum transcription factor with AP2 domain(s), putative (AP2-O), partial mRNA blastn 28 52.8 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium relictum
19873217 19873217 PRJNA770361_P_NODE_416_length_1345_cov_1.647013_g382_i0 PRJNA770361 416 1345 1.647013 22.15232485 Neospora caninum 29176 SAR_Eukaryotes SAR_Eukaryotes 1040 0   NTclustered gi|401405636|ref|XM_003882219.1| 572307 g382 i0 80.772 22.528624535316 1347 245 99 12 1 1340 276 1615 Neospora caninum Liverpool putative elongation factor 2 (NCLIV_020220), partial mRNA blastn 30301 1040 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Neospora Neospora caninum
24973040 24973040 PRJNA770361_P_NODE_3900_length_477_cov_5.099010_g3805_i0 PRJNA770361 3900 477 5.09901 24.3222777 Cryptosporidium parvum 5807 SAR_Eukaryotes SAR_Eukaryotes 272 3.2699999999999998e-68   NTclustered gi|126649276|ref|XM_001388273.1| 353152 g3805 i0 80.27 7.9979035639413 370 66 77 5 111 476 112 478 Cryptosporidium parvum Iowa II ribosomal protein S23 (cgd6_1390) mRNA, partial cds blastn 3815 272 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Cryptosporidiidae Cryptosporidium Cryptosporidium parvum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;