RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA770361" and tax_phylum = "Annelida"

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tax_superkingdom 1

tax_phylum 1

  • Annelida · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA770361 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4574646 4574646 PRJNA770361_P_NODE_1704_length_718_cov_9.539535_g1613_i0 PRJNA770361 1704 718 9.539535 68.4938613 Ailoscolex lacteospumosus 1046305 Annelida Annelida 65.8 9.22e-6   NTclustered gi|2920003608|emb|OZ238872.1| 1046305 g1613 i0 83.333 0.590529247910863 72 10 10 2 28 98 19159048 19159118 Ailoscolex lacteospumosus genome assembly, chromosome: 13 blastn 424 65.8 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Crassiclitellata Ailoscolecidae Ailoscolex Ailoscolex lacteospumosus
16049016 16049016 PRJNA770361_P_NODE_4273_length_455_cov_2.887435_g4178_i0 PRJNA770361 4273 455 2.887435 13.13782925 Ailoscolex lacteospumosus 1046305 Annelida Annelida 58.4 0.001   NTclustered gi|2920003608|emb|OZ238872.1| 1046305 g4178 i0 100 0.252747252747253 31 0 7 0 94 124 3805574 3805544 Ailoscolex lacteospumosus genome assembly, chromosome: 13 blastn 115 58.4 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Crassiclitellata Ailoscolecidae Ailoscolex Ailoscolex lacteospumosus
23699337 23699337 PRJNA770361_P_NODE_19139_length_242_cov_0.917160_g19044_i0 PRJNA770361 19139 242 0.91716 2.2195272 Calamyzinae sp. TA-2012 1192179 Annelida Annelida 381 2.449999999999999e-101   NTclustered gi|462674352|gb|JX078951.1| 1192179 g19044 i0 95.062 60.2231404958678 243 10 100 2 1 242 386 145 Calamyzinae sp. TA-2012 16S ribosomal RNA gene, partial sequence; mitochondrial blastn 14574 381 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Phyllodocida Chrysopetalidae   Calamyzinae sp. TA-2012

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;