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contig_metadata

31 rows where analysis = "blastn", bioproject = "PRJNA767802" and tax_phylum = "Streptophyta"

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tax_superkingdom 1

tax_phylum 1

  • Streptophyta · 31 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA767802 · 31 ✖

analysis 1

  • blastn · 31 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
745134 745134 PRJNA767802_P_NODE_11061_length_212_cov_2.110429_g10988_i0 PRJNA767802 11061 212 2.110429 4.47410948 Hordeum vulgare 4513 Plants Plants 364 2.109999999999999e-96   NTclustered gi|326518443|dbj|AK357036.1| 112509 g10988 i0 97.642 2 212 5 100 0 1 212 1066 855 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv1044K23 blastn 424 364 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Hordeum Hordeum vulgare
2021144 2021144 PRJNA767802_P_NODE_1082_length_878_cov_10.471653_g1035_i0 PRJNA767802 1082 878 10.471653 91.94111334 Arabidopsis thaliana 3702 Plants Plants 1587 0   NTclustered gi|145361196|ref|NM_148193.2| 3702 g1035 i0 100 39.2232346241458 859 0 98 0 1 859 889 31 Arabidopsis thaliana insulin-induced protein (AT4G01935), mRNA blastn 34438 1587 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Brassicales Brassicaceae Arabidopsis Arabidopsis thaliana
2021214 2021214 PRJNA767802_P_NODE_262_length_1539_cov_7.797315_g246_i0 PRJNA767802 262 1539 7.797315 120.00067785 Hordeum vulgare 4513 Plants Plants 2700 0   NTclustered gi|326492679|dbj|AK358985.1| 112509 g246 i0 98.749 83.7985705003249 1519 19 99 0 1 1519 1519 1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv1086P13 blastn 128966 2700 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Hordeum Hordeum vulgare
3296434 3296434 PRJNA767802_P_NODE_4323_length_408_cov_3.172702_g4250_i0 PRJNA767802 4323 408 3.172702 12.94462416 Arabidopsis thaliana 3702 Plants Plants 737 0   NTclustered gi|1063735682|ref|NM_123618.6| 3702 g4250 i0 100 12.5563725490196 399 0 98 0 10 408 148 546 Arabidopsis thaliana uncharacterized protein (AT5G42530), mRNA blastn 5123 737 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Brassicales Brassicaceae Arabidopsis Arabidopsis thaliana
3757863 3757863 PRJNA767802_P_NODE_4683_length_387_cov_1.677515_g4610_i0 PRJNA767802 4683 387 1.677515 6.49198305 Setaria 4554 Plants Plants 207 7.45e-49   NTclustered gi|1256485070|ref|XM_004964431.4| 4555 g4610 i0 99.13 3.55297157622739 115 1 30 0 1 115 1170 1056 PREDICTED: Setaria italica acid phosphatase 1 (LOC101779725), transcript variant X1, mRNA blastn 1375 207 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Setaria Setaria italica
4573516 4573516 PRJNA767802_P_NODE_704_length_1075_cov_9.115984_g671_i0 PRJNA767802 704 1075 9.115984 97.996828 Arabidopsis thaliana 3702 Plants Plants 1943 0   NTclustered gi|1833339234|gb|MT223955.1| 3702 g671 i0 99.905 43.0251162790698 1056 0 98 1 1 1056 92088 93142 Arabidopsis thaliana ecotype Col-0 thalianol gene cluster, complete sequence blastn 46252 1943 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Brassicales Brassicaceae Arabidopsis Arabidopsis thaliana
5848737 5848737 PRJNA767802_P_NODE_2965_length_520_cov_12.021231_g2895_i0 PRJNA767802 2965 520 12.021231 62.5104012 Picea sitchensis 3332 Plants Plants 686 0   NTclustered gi|148908651|gb|EF677623.1| 3332 g2895 i0 91.502 2.91730769230769 506 32 96 8 2 500 1277 776 Picea sitchensis clone WS02771_N16 unknown mRNA blastn 1517 686 1 Eukaryota Embryophyta Viridiplantae Streptophyta Pinopsida Pinales Pinaceae Picea Picea sitchensis
5848749 5848749 PRJNA767802_P_NODE_5265_length_355_cov_3.133987_g5192_i0 PRJNA767802 5265 355 3.133987 11.12565385 Oryza sativa 4530 Plants Plants 503 7.71e-138   NTclustered gi|32995229|dbj|AK110020.1| 39947 g5192 i0 93.75 3.83380281690141 336 19 94 2 21 355 2946 3280 Oryza sativa Japonica Group cDNA clone:002-159-H09, full insert sequence blastn 1361 503 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Oryza Oryza sativa
7123852 7123852 PRJNA767802_P_NODE_12826_length_193_cov_1.861111_g12753_i0 PRJNA767802 12826 193 1.861111 3.59194423 Pinus massoniana 88730 Plants Plants 357 3.1499999999999996e-94   NTclustered gi|259014710|gb|GQ497815.1| 88730 g12753 i0 100 1.98445595854922 193 0 100 0 1 193 729 921 Pinus massoniana cyclophilin mRNA, complete cds blastn 383 357 1 Eukaryota Embryophyta Viridiplantae Streptophyta Pinopsida Pinales Pinaceae Pinus Pinus massoniana
7123942 7123942 PRJNA767802_P_NODE_7526_length_277_cov_2.956140_g7453_i0 PRJNA767802 7526 277 2.95614 8.1885078 Oryza sativa 4530 Plants Plants 359 1.34e-94   NTclustered gi|116640607|emb|CT836548.1| 39946 g7453 i0 90.182 268.032490974729 275 27 100 0 1 275 875 601 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA126A09, full insert sequence blastn 74245 359 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Oryza Oryza sativa
8398397 8398397 PRJNA767802_P_NODE_2727_length_545_cov_9.743952_g2659_i0 PRJNA767802 2727 545 9.743952 53.1045384 Arabidopsis thaliana 3702 Plants Plants 968 0   NTclustered gi|1063687710|ref|NM_102895.4| 3702 g2659 i0 100 12.5266055045872 524 0 96 0 22 545 283 806 Arabidopsis thaliana ECS1 (ECS1), mRNA blastn 6827 968 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Brassicales Brassicaceae Arabidopsis Arabidopsis thaliana
10949252 10949252 PRJNA767802_P_NODE_1649_length_711_cov_11.172205_g1593_i0 PRJNA767802 1649 711 11.172205 79.43437755 Arabidopsis thaliana 3702 Plants Plants 1312 0   NTclustered gi|1063734958|ref|NM_123202.4| 3702 g1593 i0 100 90.0393811533052 710 0 99 0 2 711 291 1000 Arabidopsis thaliana Ribulose bisphosphate carboxylase (small chain) family protein (RBCS3B), mRNA blastn 64018 1312 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Brassicales Brassicaceae Arabidopsis Arabidopsis thaliana
10949287 10949287 PRJNA767802_P_NODE_2289_length_600_cov_12.874773_g2224_i0 PRJNA767802 2289 600 12.874773 77.248638 Carya illinoinensis 32201 Plants Plants 1035 0   NTclustered gi|2082361373|ref|XM_043133223.1| 32201 g2224 i0 98.801 3.835 584 1 97 1 17 600 2296 2873 PREDICTED: Carya illinoinensis cation/H(+) antiporter 19 (LOC122316581), mRNA blastn 2301 1035 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Fagales Juglandaceae Carya Carya illinoinensis
11409902 11409902 PRJNA767802_P_NODE_1849_length_669_cov_8.261290_g1789_i0 PRJNA767802 1849 669 8.26129 55.2680301 Picea 3328 Plants Plants 845 0   NTclustered gi|270139676|gb|BT106628.1| 3330 g1789 i0 90.484 27.2765321375187 641 60 96 1 28 668 2 641 Picea glauca clone GQ03006_M09 mRNA sequence blastn 18248 848 0.996462264150943 Eukaryota Embryophyta Viridiplantae Streptophyta Pinopsida Pinales Pinaceae Picea Picea glauca
12224886 12224886 PRJNA767802_P_NODE_750_length_1046_cov_9.684052_g715_i0 PRJNA767802 750 1046 9.684052 101.29518392 Arabidopsis thaliana 3702 Plants Plants 1893 0   NTclustered gi|15983445|gb|AF424597.1|AF424597 3702 g715 i0 100 78.0602294455067 1025 0 98 0 1 1025 1025 1 Arabidopsis thaliana AT4g10340/F24G24_140 mRNA, complete cds blastn 81651 1893 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Brassicales Brassicaceae Arabidopsis Arabidopsis thaliana
12685732 12685732 PRJNA767802_P_NODE_3150_length_502_cov_2.454746_g3079_i0 PRJNA767802 3150 502 2.454746 12.32282492 Triticum 4564 Plants Plants 917 0   NTclustered gi|2123708156|ref|XM_044484262.1| 4565 g3079 i0 99.602 28.7350597609562 502 2 100 0 1 502 2002 1501 PREDICTED: Triticum aestivum YTH domain-containing protein ECT1-like (LOC123061255), transcript variant X1, mRNA blastn 14425 917 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Triticum Triticum aestivum
14774057 14774057 PRJNA767802_P_NODE_1452_length_759_cov_10.794366_g1400_i0 PRJNA767802 1452 759 10.794366 81.92923794 Arabidopsis thaliana 3702 Plants Plants 1365 0   NTclustered gi|17065071|gb|AY062612.1| 3702 g1400 i0 100 80.8906455862978 739 0 97 0 21 759 7 745 Arabidopsis thaliana ribulose bisphosphate carboxylase, small subunit (F5A8.1) mRNA, complete cds blastn 61396 1365 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Brassicales Brassicaceae Arabidopsis Arabidopsis thaliana
16047788 16047788 PRJNA767802_P_NODE_3573_length_461_cov_5.245146_g3500_i0 PRJNA767802 3573 461 5.245146 24.18012306 Cryptomeria japonica 3369 Plants Plants 296 1.87e-75   NTclustered gi|2531583558|ref|XM_057989559.1| 3369 g3500 i0 92.754 0.915401301518438 207 11 90 2 238 442 2421 2217 PREDICTED: Cryptomeria japonica protein EDS1B (LOC131054951), mRNA blastn 422 296 1 Eukaryota Embryophyta Viridiplantae Streptophyta Pinopsida Cupressales Cupressaceae Cryptomeria Cryptomeria japonica
17323547 17323547 PRJNA767802_P_NODE_5914_length_328_cov_4.630824_g5841_i0 PRJNA767802 5914 328 4.630824 15.18910272 Brachypodium distachyon 15368 Plants Plants 91.6 6.54e-14   NTclustered gi|554776869|dbj|AK430621.1| 15368 g5841 i0 77.987 1.78048780487805 159 26 46 6 103 252 233 391 Brachypodium distachyon mRNA, clone: PL016C01-A-041_F13 blastn 584 91.6 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Brachypodium Brachypodium distachyon
17323551 17323551 PRJNA767802_P_NODE_734_length_1054_cov_10.181095_g700_i0 PRJNA767802 734 1054 10.181095 107.3087413 Arabidopsis thaliana 3702 Plants Plants 1879 0   NTclustered gi|430946|gb|U01103.1|U01103 3702 g700 i0 99.708 71.8937381404175 1026 3 97 0 20 1045 1054 29 Arabidopsis thaliana PSI type III chlorophyll a/b-binding protein (Lhca3*1) mRNA, complete cds blastn 75776 1879 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Brassicales Brassicaceae Arabidopsis Arabidopsis thaliana
17323561 17323561 PRJNA767802_P_NODE_834_length_991_cov_7.317410_g796_i0 PRJNA767802 834 991 7.31741 72.5155331 Hordeum vulgare 4513 Plants Plants 1748 0   NTclustered gi|326492755|dbj|AK359023.1| 112509 g796 i0 99.378 26.4076690211907 964 6 97 0 28 991 2 965 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv1087J18 blastn 26170 1748 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Hordeum Hordeum vulgare
18596836 18596836 PRJNA767802_P_NODE_1155_length_852_cov_7.533001_g1108_i0 PRJNA767802 1155 852 7.533001 64.18116852 Arabidopsis thaliana 3702 Plants Plants 1535 0   NTclustered gi|145359688|ref|NM_125946.3| 3702 g1108 i0 100 28.6244131455399 831 0 98 0 22 852 357 1187 Arabidopsis thaliana uncharacterized protein (AT5G65480), mRNA blastn 24388 1535 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Brassicales Brassicaceae Arabidopsis Arabidopsis thaliana
18596925 18596925 PRJNA767802_P_NODE_395_length_1340_cov_5.303641_g374_i0 PRJNA767802 395 1340 5.303641 71.0687894 Arabidopsis thaliana 3702 Plants Plants 2438 0   NTclustered gi|1063732830|ref|NM_121958.4| 3702 g374 i0 100 58.1417910447761 1320 0 99 0 1 1320 1445 126 Arabidopsis thaliana S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (ACL5), mRNA blastn 77910 2438 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Brassicales Brassicaceae Arabidopsis Arabidopsis thaliana
18596947 18596947 PRJNA767802_P_NODE_7355_length_282_cov_1.596567_g7282_i0 PRJNA767802 7355 282 1.596567 4.50231894 Triticum monococcum 4568 Plants Plants 387 6.279999999999998e-103   NTclustered gi|18496650|gb|AF459639.1| 4568 g7282 i0 92.308 11.0390070921986 273 20 97 1 3 275 104020 103749 Triticum monococcum BAC clones 116F2 and 115G1 gene sequence blastn 3113 387 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Triticum Triticum monococcum
20332500 20332500 PRJNA767802_P_NODE_4016_length_429_cov_2.468421_g3943_i0 PRJNA767802 4016 429 2.468421 10.58952609 Arabidopsis 3701 Plants Plants 793 0   NTclustered gi|2065944015|gb|MN603471.1| 3702 g3943 i0 100 103.979020979021 429 0 100 0 1 429 125537 125109 Arabidopsis thaliana chloroplast, complete genome blastn 44607 793 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Brassicales Brassicaceae Arabidopsis Arabidopsis thaliana
21147777 21147777 PRJNA767802_P_NODE_4397_length_404_cov_4.597183_g4324_i0 PRJNA767802 4397 404 4.597183 18.57261932 Arabidopsis thaliana 3702 Plants Plants 695 0   NTclustered gi|20453134|gb|AY094437.1| 3702 g4324 i0 99.478 67.6386138613861 383 1 95 1 11 392 945 563 Arabidopsis thaliana AT3g54890/F28P10_130 mRNA, complete cds blastn 27326 695 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Brassicales Brassicaceae Arabidopsis Arabidopsis thaliana
22883795 22883795 PRJNA767802_P_NODE_3038_length_513_cov_1.459052_g2967_i0 PRJNA767802 3038 513 1.459052 7.48493676 Triticum 4564 Plants Plants 924 0   NTclustered gi|2123708156|ref|XM_044484262.1| 4565 g2967 i0 99.222 26.5185185185185 514 1 99 1 3 513 2010 2523 PREDICTED: Triticum aestivum YTH domain-containing protein ECT1-like (LOC123061255), transcript variant X1, mRNA blastn 13604 924 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Triticum Triticum aestivum
23698139 23698139 PRJNA767802_P_NODE_199_length_1685_cov_7.287286_g186_i0 PRJNA767802 199 1685 7.287286 122.7907691 Arabidopsis thaliana 3702 Plants Plants 3096 0   NTclustered gi|1063727218|ref|NM_119831.3| 3702 g186 i0 100 38.8712166172107 1676 0 99 0 10 1685 121 1796 Arabidopsis thaliana Major facilitator superfamily protein (PMT6), mRNA blastn 65498 3096 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Brassicales Brassicaceae Arabidopsis Arabidopsis thaliana
23698140 23698140 PRJNA767802_P_NODE_2359_length_591_cov_7.295203_g2294_i0 PRJNA767802 2359 591 7.295203 43.114649729999996 Carya illinoinensis 32201 Plants Plants 944 0   NTclustered gi|2082433812|ref|XM_043131623.1| 32201 g2294 i0 99.424 23.9103214890017 521 2 88 1 52 572 542 23 PREDICTED: Carya illinoinensis NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-B (LOC122315609), mRNA blastn 14131 944 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Fagales Juglandaceae Carya Carya illinoinensis
24971830 24971830 PRJNA767802_P_NODE_2940_length_523_cov_7.537975_g2870_i0 PRJNA767802 2940 523 7.537975 39.42360925 Arabidopsis thaliana 3702 Plants Plants 915 0   NTclustered gi|62318599|dbj|AK220620.1| 3702 g2870 i0 99.601 33.5105162523901 501 2 96 0 1 501 506 6 Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL19-91-I22 blastn 17526 915 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Brassicales Brassicaceae Arabidopsis Arabidopsis thaliana
24971841 24971841 PRJNA767802_P_NODE_5680_length_337_cov_2.298611_g5607_i0 PRJNA767802 5680 337 2.298611 7.74631907 Solanum lycopersicum 4081 Plants Plants 370 7.73e-98   NTclustered gi|506949392|gb|AC254351.2| 4081 g5607 i0 87.736 30.7596439169139 318 38 94 1 21 337 58992 59309 Solanum lycopersicum strain Heinz 1706 chromosome 6 clone sle-45f1 map 6, complete sequence blastn 10366 370 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Solanales Solanaceae Solanum Solanum lycopersicum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;