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contig_metadata

14 rows where analysis = "blastn", bioproject = "PRJNA767802" and tax_phylum = "Ciliophora"

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tax_superkingdom 1

tax_phylum 1

  • Ciliophora · 14 ✖

tax_clade 1

bioproject 1

  • PRJNA767802 · 14 ✖

analysis 1

  • blastn · 14 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
745212 745212 PRJNA767802_P_NODE_5681_length_337_cov_2.121528_g5608_i0 PRJNA767802 5681 337 2.121528 7.14954936 Kyaroikeus paracetarius 2684852 SAR_Eukaryotes SAR_Eukaryotes 257 6.28e-64   NTclustered gi|1784308422|gb|MN830170.1| 2684852 g5608 i0 83.391 9.51928783382789 289 37 84 10 1 283 284 1 Kyaroikeus paracetarius isolate LJ-I-20170502 large subunit ribosomal RNA gene, partial sequence blastn 3208 257 1 Eukaryota Sar   Ciliophora Phyllopharyngea Dysteriida Kyaroikeidae Kyaroikeus Kyaroikeus paracetarius
8398414 8398414 PRJNA767802_P_NODE_6607_length_305_cov_1.593750_g6534_i0 PRJNA767802 6607 305 1.59375 4.8609375 Paramecium tetraurelia 5888 SAR_Eukaryotes SAR_Eukaryotes 322 1.96e-83   NTclustered gi|2386234047|ref|XM_001435408.2| 5888 g6534 i0 86.242 91.127868852459 298 40 98 1 5 302 1349 1053 Paramecium tetraurelia uncharacterized protein (GSPATT00036831001), mRNA blastn 27794 322 1 Eukaryota Sar   Ciliophora Oligohymenophorea Peniculida Parameciidae Paramecium Paramecium tetraurelia
8859223 8859223 PRJNA767802_P_NODE_7707_length_272_cov_4.717489_g7634_i0 PRJNA767802 7707 272 4.717489 12.83157008 Chilodonella 151076 SAR_Eukaryotes SAR_Eukaryotes 202 2.3399999999999997e-47   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g7634 i0 89.375 27.5625 160 17 59 0 1 160 2923 3082 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 7497 202 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
9673673 9673673 PRJNA767802_P_NODE_7268_length_284_cov_3.229787_g7195_i0 PRJNA767802 7268 284 3.229787 9.17259508 uncultured haptorid ciliate 282486 SAR_Eukaryotes SAR_Eukaryotes 462 1.02e-125   NTclustered gi|2006881171|emb|HG996127.1| 282486 g7195 i0 98.113 93.2746478873239 265 5 93 0 20 284 400 664 uncultured haptorid ciliate genomic DNA sequence contains 18S rRNA gene, ITS1, 5.8S rRNA gene, ITS2, 28S rRNA gene, clone b167ffb8 blastn 26490 462 1 Eukaryota Sar   Ciliophora Litostomatea Haptorida     uncultured haptorid ciliate
10949303 10949303 PRJNA767802_P_NODE_7149_length_288_cov_2.100418_g7076_i0 PRJNA767802 7149 288 2.100418 6.04920384 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 342 1.4099999999999996e-89   NTclustered gi|301014695|gb|GQ377692.1| 151077 g7076 i0 89.591 72.5625 269 28 93 0 9 277 181 449 Chilodonella uncinata ribosomal protein S23a-like (rps23a) mRNA, complete sequence blastn 20898 342 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
13960062 13960062 PRJNA767802_P_NODE_9491_length_235_cov_1.645161_g9418_i0 PRJNA767802 9491 235 1.645161 3.86612835 Trithigmostoma 37473 SAR_Eukaryotes SAR_Eukaryotes 407 3.9e-109   NTclustered gi|624039|emb|X71134.1| 37474 g9418 i0 99.552 95.668085106383 223 1 95 0 1 223 309 87 T.steini gene for small subunit 16S-like ribosomal RNA blastn 22482 407 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Trithigmostoma Trithigmostoma steini
14774113 14774113 PRJNA767802_P_NODE_19092_length_159_cov_2.318182_g19019_i0 PRJNA767802 19092 159 2.318182 3.68590938 Vorticella sp. 1 2979179 SAR_Eukaryotes SAR_Eukaryotes 248 1.5599999999999998e-61   NTclustered gi|2304601489|gb|OP458310.1| 2979179 g19019 i0 96.689 94.4716981132076 151 2 93 2 12 159 78 228 Vorticella sp. 1 large subunit ribosomal RNA gene, partial sequence blastn 15021 248 1 Eukaryota Sar   Ciliophora Oligohymenophorea Sessilida Vorticellidae Vorticella Vorticella sp. 1
14774129 14774129 PRJNA767802_P_NODE_4952_length_371_cov_2.422360_g4879_i0 PRJNA767802 4952 371 2.42236 8.9869556 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 294 5.31e-75   NTclustered gi|110645006|gb|DQ665938.1| 151077 g4879 i0 85.714 7.83288409703504 280 38 75 2 84 362 792 514 Chilodonella uncinata actin gene, partial cds; macronuclear blastn 2906 294 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
16047726 16047726 PRJNA767802_P_NODE_10493_length_220_cov_1.397661_g10420_i0 PRJNA767802 10493 220 1.397661 3.0748542 Glaucoma scintillans 210825 SAR_Eukaryotes SAR_Eukaryotes 355 1.33e-93   NTclustered gi|2624665746|gb|OR878271.1| 210825 g10420 i0 97.585 82.7454545454545 207 5 94 0 14 220 591 797 Glaucoma scintillans isolate LLH20220320 large subunit ribosomal RNA gene, partial sequence blastn 18204 355 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Glaucomidae Glaucoma Glaucoma scintillans
16047796 16047796 PRJNA767802_P_NODE_5093_length_363_cov_14.312102_g5020_i0 PRJNA767802 5093 363 14.312102 51.95293026 Trithigmostoma cucullulus 1346499 SAR_Eukaryotes SAR_Eukaryotes 479 1.3299999999999993e-130   NTclustered gi|759083539|gb|KM222156.1| 1346499 g5020 i0 99.245 90.1460055096419 265 2 73 0 1 265 265 1 Trithigmostoma cucullulus voucher CXM08110902 large subunit ribosomal RNA gene, partial sequence blastn 32723 479 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Trithigmostoma Trithigmostoma cucullulus
19871978 19871978 PRJNA767802_P_NODE_18396_length_162_cov_0.902655_g18323_i0 PRJNA767802 18396 162 0.902655 1.4623011 Epispathidium amphoriforme 114794 SAR_Eukaryotes SAR_Eukaryotes 202 1.26e-47   NTclustered gi|6980029|gb|AF223570.1|AF223570 114794 g18323 i0 98.261 63.5185185185185 115 2 71 0 48 162 2439 2553 Spathidium amphoriforme internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 10290 202 1 Eukaryota Sar   Ciliophora Litostomatea Haptorida Spathidiidae Epispathidium Epispathidium amphoriforme
21147676 21147676 PRJNA767802_P_NODE_10597_length_218_cov_3.982249_g10524_i0 PRJNA767802 10597 218 3.982249 8.68130282 Tetrahymena thermophila 5911 SAR_Eukaryotes SAR_Eukaryotes 139 1.44e-28   NTclustered gi|829194699|ref|XM_001025224.3| 312017 g10524 i0 87.705 0.559633027522936 122 11 55 4 78 197 356 237 Tetrahymena thermophila SB210 S25 ribosomal protein partial mRNA blastn 122 139 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
21608232 21608232 PRJNA767802_P_NODE_10017_length_226_cov_1.785311_g9944_i0 PRJNA767802 10017 226 1.785311 4.03480286 Vorticella 60849 SAR_Eukaryotes SAR_Eukaryotes 418 1.7199999999999998e-112   NTclustered gi|300078458|gb|GU187052.1| 858372 g9944 i0 100 100 226 0 100 0 1 226 1327 1552 Vorticella sp. SP-2009-5 18S ribosomal RNA gene, partial sequence blastn 22600 418 1 Eukaryota Sar   Ciliophora Oligohymenophorea Sessilida Vorticellidae Vorticella Vorticella sp. SP-2009-5
22883796 22883796 PRJNA767802_P_NODE_3998_length_430_cov_3.929134_g3925_i0 PRJNA767802 3998 430 3.929134 16.8952762 Trithigmostoma 37473 SAR_Eukaryotes SAR_Eukaryotes 789 0   NTclustered gi|1831813219|emb|LT993477.1| 187299 g3925 i0 99.767 100.086046511628 430 1 100 0 1 430 749 1178 uncultured ciliate partial 18S rRNA gene, isolate Specimen ID 73 blastn 43037 795 0.992452830188679 Eukaryota Sar   Ciliophora         uncultured ciliate

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;