RNAquarium Metadata Server
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contig_metadata

7 rows where analysis = "blastn", bioproject = "PRJNA766854" and tax_kingdom = "Thermotogati"

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tax_superkingdom 1

tax_kingdom 1

  • Thermotogati · 7 ✖

bioproject 1

  • PRJNA766854 · 7 ✖

analysis 1

  • blastn · 7 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8398178 8398178 PRJNA766854_P_NODE_767_length_460_cov_1.109049_g658_i0 PRJNA766854 767 460 1.109049 5.1016254 Fretibacterium fastidiosum 651822 Bacteria Bacteria 71.3 1.23e-7   NTclustered gi|2869663113|emb|OZ209244.1| 651822 g658 i0 89.286 0.121739130434783 56 6 12 0 197 252 1552203 1552148 Fretibacterium fastidiosum strain SGP1 genome assembly, chromosome: Ff3 blastn 56 71.3 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Aminobacteriaceae Fretibacterium Fretibacterium fastidiosum
11409776 11409776 PRJNA766854_P_NODE_1549_length_333_cov_3.282895_g1424_i0 PRJNA766854 1549 333 3.282895 10.93204035 Fervidobacteriaceae 1643950 Bacteria Bacteria 122 2.3599999999999998e-23   NTclustered gi|61657861|emb|AJ876542.1| 2424 g1424 i0 94.872 46 78 4 44 0 256 333 96 19 Fervidobacterium nodosum partial 23S rRNA gene blastn 15318 122 1 Bacteria   Thermotogati Thermotogota Thermotogae Thermotogales Fervidobacteriaceae Fervidobacterium Fervidobacterium nodosum
16508870 16508870 PRJNA766854_P_NODE_1713_length_318_cov_1.920415_g1588_i0 PRJNA766854 1713 318 1.920415 6.1069197 Deinococcus 1298 Bacteria Bacteria 119 2.9e-22   NTclustered gi|730601855|gb|CP010028.1| 57497 g1588 i0 100 70.3584905660377 64 0 20 0 255 318 70536 70599 Deinococcus swuensis strain DY59, complete genome blastn 22374 119 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus radiopugnans
17323287 17323287 PRJNA766854_P_NODE_2374_length_279_cov_3.428000_g2248_i0 PRJNA766854 2374 279 3.428 9.56412 Deinococcus actinosclerus 1768108 Bacteria Bacteria 438 1.6899999999999996e-118   NTclustered gi|972944657|gb|CP013910.1| 1768108 g2248 i0 94.982 481.598566308244 279 14 100 0 1 279 74588 74310 Deinococcus actinosclerus strain BM2 chromosome, complete genome blastn 134366 438 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus actinosclerus
18596652 18596652 PRJNA766854_P_NODE_1615_length_326_cov_4.781145_g1490_i0 PRJNA766854 1615 326 4.781145 15.5865327 Thermosipho ferrireducens 2571116 Bacteria Bacteria 156 2.27e-33   NTclustered gi|2006729518|gb|CP071446.1| 2571116 g1490 i0 96.774 54.9110429447853 93 3 44 0 173 265 420069 420161 Thermosipho ferrireducens strain JL129W03 chromosome, complete genome blastn 17901 156 1 Bacteria   Thermotogati Thermotogota Thermotogae Thermotogales Fervidobacteriaceae Thermosipho Thermosipho ferrireducens
19057699 19057699 PRJNA766854_P_NODE_1415_length_349_cov_2.856250_g1290_i0 PRJNA766854 1415 349 2.85625 9.9683125 Fervidobacterium 2422 Bacteria Bacteria 147 1.47e-30   NTclustered gi|2793125101|gb|CP126499.1| 2423 g1290 i0 97.674 47.4842406876791 86 0 45 2 3 87 1622366 1622282 Fervidobacterium islandicum strain H-21 chromosome, complete genome blastn 16572 147 1 Bacteria   Thermotogati Thermotogota Thermotogae Thermotogales Fervidobacteriaceae Fervidobacterium Fervidobacterium islandicum
22422246 22422246 PRJNA766854_P_NODE_1598_length_328_cov_3.207358_g1473_i0 PRJNA766854 1598 328 3.207358 10.52013424 Fervidobacterium gondwanense 44754 Bacteria Bacteria 196 1.35e-45   NTclustered gi|2793121053|gb|CP126498.1| 44754 g1473 i0 90.26 93.8932926829268 154 9 77 5 3 153 973907 973757 Fervidobacterium gondwanense strain 13770 chromosome, complete genome blastn 30797 196 1 Bacteria   Thermotogati Thermotogota Thermotogae Thermotogales Fervidobacteriaceae Fervidobacterium Fervidobacterium gondwanense

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;