contig_metadata
13 rows where analysis = "blastn", bioproject = "PRJNA764222" and tax_phylum = "Bacteroidota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2020816 | 2020816 | PRJNA764222_S_NODE_3362_length_342_cov_2.783051_g3204_i0 | PRJNA764222 | 3362 | 342 | 2.783051 | 9.51803442 | Bacteroidales bacterium | 2030927 | Bacteria | Bacteria | 54.7 | 0.009 | NTclustered | gi|2621786220|emb|OY782678.1| | 2030927 | g3204 | i0 | 100 | 0.0847953216374269 | 29 | 0 | 8 | 0 | 146 | 174 | 472981 | 472953 | MAG: Bacteroidales bacterium isolate 1f9300ae-d6db-4a26-8fb7-1be2ee45184d genome assembly, chromosome: 1 | blastn | 29 | 54.7 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Bacteroidia | Bacteroidales | Bacteroidales bacterium | |||
| 4573073 | 4573073 | PRJNA764222_S_NODE_2984_length_354_cov_1.602606_g2826_i0 | PRJNA764222 | 2984 | 354 | 1.602606 | 5.67322524 | Fibrella aestuarina | 651143 | Bacteria | Bacteria | 355 | 2.28e-93 | NTclustered | gi|384064804|emb|HE796683.1| | 1166018 | g2826 | i0 | 86.053 | 353.231638418079 | 337 | 40 | 95 | 7 | 1 | 333 | 608627 | 608960 | Fibrella aestuarina BUZ 2 drat genome | blastn | 125044 | 355 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Cytophagia | Cytophagales | Spirosomataceae | Fibrella | Fibrella aestuarina | |
| 5034122 | 5034122 | PRJNA764222_S_NODE_33784_length_154_cov_2.383178_g33626_i0 | PRJNA764222 | 33784 | 154 | 2.383178 | 3.67009412 | Blattabacterium | 34098 | Bacteria | Bacteria | 145 | 2.03e-30 | NTclustered | gi|1893901203|gb|CP059198.1| | 1653831 | g33626 | i0 | 88.43 | 62.8376623376623 | 121 | 12 | 78 | 2 | 35 | 154 | 404589 | 404708 | Blattabacterium cuenoti strain MEGALOsp chromosome | blastn | 9677 | 145 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Flavobacteriia | Flavobacteriales | Blattabacteriaceae | Blattabacterium | Blattabacterium cuenoti | |
| 5848121 | 5848121 | PRJNA764222_S_NODE_16645_length_225_cov_1.707865_g16487_i0 | PRJNA764222 | 16645 | 225 | 1.707865 | 3.84269625 | Flavobacterium capsici | 3075618 | Bacteria | Bacteria | 52.8 | 0.02 | NTclustered | gi|2582099103|gb|CP134890.1| | 3075618 | g16487 | i0 | 100 | 0.248888888888889 | 28 | 0 | 12 | 0 | 164 | 191 | 2977747 | 2977774 | Flavobacterium capsici strain PMTSA4 chromosome, complete genome | blastn | 56 | 52.8 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Flavobacteriia | Flavobacteriales | Flavobacteriaceae | Flavobacterium | Flavobacterium capsici | |
| 5848238 | 5848238 | PRJNA764222_S_NODE_25105_length_188_cov_1.113475_g24947_i0 | PRJNA764222 | 25105 | 188 | 1.113475 | 2.093333 | Prolixibacteraceae bacterium | 2053594 | Bacteria | Bacteria | 52.8 | 0.016 | NTclustered | gi|2621786417|emb|OY782875.1| | 2053594 | g24947 | i0 | 100 | 0.148936170212766 | 28 | 0 | 15 | 0 | 63 | 90 | 1412111 | 1412084 | MAG: Prolixibacteraceae bacterium isolate 03360cef-1fb4-4bdc-8d3a-9e0c45a661a4 genome assembly, chromosome: 1 | blastn | 28 | 52.8 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Bacteroidia | Marinilabiliales | Prolixibacteraceae | Prolixibacteraceae bacterium | ||
| 9672985 | 9672985 | PRJNA764222_S_NODE_11248_length_254_cov_3.613527_g11090_i0 | PRJNA764222 | 11248 | 254 | 3.613527 | 9.17835858 | Aquimarina sp. LLG6339-5 | 3160830 | Bacteria | Bacteria | 52.8 | 0.023 | NTclustered | gi|2858555899|gb|CP159328.1| | 3160830 | g11090 | i0 | 100 | 0.110236220472441 | 28 | 0 | 11 | 0 | 55 | 82 | 3361726 | 3361753 | Aquimarina sp. LLG6339-5 chromosome, complete genome | blastn | 28 | 52.8 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Flavobacteriia | Flavobacteriales | Flavobacteriaceae | Aquimarina | Aquimarina sp. LLG6339-5 | |
| 10134393 | 10134393 | PRJNA764222_S_NODE_31868_length_164_cov_1.034188_g31710_i0 | PRJNA764222 | 31868 | 164 | 1.034188 | 1.69606832 | Flavobacterium | 237 | Bacteria | Bacteria | 294 | 2.06e-75 | NTclustered | gi|2922046464|gb|CP182943.1| | 1355330 | g31710 | i0 | 100 | 489.615853658537 | 159 | 0 | 97 | 0 | 1 | 159 | 575228 | 575070 | Flavobacterium faecale strain WV33 chromosome, complete genome | blastn | 80297 | 294 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Flavobacteriia | Flavobacteriales | Flavobacteriaceae | Flavobacterium | Flavobacterium faecale | |
| 10134429 | 10134429 | PRJNA764222_S_NODE_8748_length_272_cov_2.048889_g8590_i0 | PRJNA764222 | 8748 | 272 | 2.048889 | 5.57297808 | Sphingobacterium | 28453 | Bacteria | Bacteria | 52.8 | 0.025 | NTclustered | gi|2463818431|gb|CP120231.1| | 341027 | g8590 | i0 | 100 | 0.216911764705882 | 28 | 0 | 10 | 0 | 167 | 194 | 4695847 | 4695820 | MAG: Sphingobacterium sp. isolate MAG 2 chromosome, complete genome | blastn | 59 | 52.8 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Sphingobacteriia | Sphingobacteriales | Sphingobacteriaceae | Sphingobacterium | Sphingobacterium sp. | |
| 12224500 | 12224500 | PRJNA764222_S_NODE_34170_length_150_cov_4.621359_g34012_i0 | PRJNA764222 | 34170 | 150 | 4.621359 | 6.9320385 | uncultured Flavobacteriales bacterium | 213322 | Bacteria | Bacteria | 174 | 2.5e-39 | NTclustered | gi|2308952759|emb|OX044359.1| | 213322 | g34012 | i0 | 89.706 | 143.26 | 136 | 14 | 91 | 0 | 8 | 143 | 217464 | 217599 | MAG: uncultured Flavobacteriales bacterium isolate C_MB391 genome assembly, chromosome: C_MB391_contig-1 | blastn | 21489 | 174 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Flavobacteriia | Flavobacteriales | uncultured Flavobacteriales bacterium | |||
| 16508656 | 16508656 | PRJNA764222_S_NODE_21833_length_201_cov_2.032468_g21675_i0 | PRJNA764222 | 21833 | 201 | 2.032468 | 4.08526068 | Bacteroides | 816 | Bacteria | Bacteria | 52.8 | 0.017 | NTclustered | gi|2032952970|gb|CP072244.1| | 28116 | g21675 | i0 | 100 | 1.95024875621891 | 28 | 0 | 14 | 0 | 144 | 171 | 2899365 | 2899338 | Bacteroides ovatus strain CL06T03C20 chromosome, complete genome | blastn | 392 | 52.8 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Bacteroidia | Bacteroidales | Bacteroidaceae | Bacteroides | Bacteroides ovatus | |
| 18596452 | 18596452 | PRJNA764222_S_NODE_28955_length_173_cov_1.555556_g28797_i0 | PRJNA764222 | 28955 | 173 | 1.555556 | 2.69111188 | Prevotella bivia | 28125 | Bacteria | Bacteria | 270 | 3.69e-68 | NTclustered | gi|2679198013|dbj|AP029376.1| | 28125 | g28797 | i0 | 94.828 | 7.20231213872832 | 174 | 8 | 100 | 1 | 1 | 173 | 133264 | 133437 | Prevotella bivia TOH-2715 DNA, chromosome 2, complete sequence | blastn | 1246 | 270 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Bacteroidia | Bacteroidales | Prevotellaceae | Prevotella | Prevotella bivia | |
| 18596457 | 18596457 | PRJNA764222_S_NODE_29255_length_172_cov_1.392000_g29097_i0 | PRJNA764222 | 29255 | 172 | 1.392 | 2.39424 | Chryseobacterium indologenes | 253 | Bacteria | Bacteria | 54.7 | 0.004 | NTclustered | gi|2039848361|gb|CP074372.1| | 253 | g29097 | i0 | 96.97 | 0.191860465116279 | 33 | 0 | 19 | 1 | 85 | 116 | 4565039 | 4565071 | Chryseobacterium indologenes strain PgBE177 chromosome, complete genome | blastn | 33 | 54.7 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Flavobacteriia | Flavobacteriales | Weeksellaceae | Chryseobacterium | Chryseobacterium indologenes | |
| 21147376 | 21147376 | PRJNA764222_S_NODE_4737_length_314_cov_1.704120_g4579_i0 | PRJNA764222 | 4737 | 314 | 1.70412 | 5.3509368 | Tenacibaculum todarodis | 1850252 | Bacteria | Bacteria | 54.7 | 0.008 | NTclustered | gi|1110849530|gb|CP018155.1| | 1850252 | g4579 | i0 | 94.286 | 0.111464968152866 | 35 | 2 | 11 | 0 | 125 | 159 | 1095264 | 1095230 | Tenacibaculum todarodis strain LPB0136 chromosome, complete genome | blastn | 35 | 54.7 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Flavobacteriia | Flavobacteriales | Flavobacteriaceae | Tenacibaculum | Tenacibaculum todarodis |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;