contig_metadata
13 rows where analysis = "blastn", bioproject = "PRJNA764222" and tax_phylum = "Actinomycetota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 6309858 | 6309858 | PRJNA764222_S_NODE_4545_length_317_cov_1.992593_g4387_i0 | PRJNA764222 | 4545 | 317 | 1.992593 | 6.31651981 | Cutibacterium | 1912216 | Bacteria | Bacteria | 586 | 6.579999999999998e-163 | NTclustered | gi|1446500593|gb|CP031442.1| | 1747 | g4387 | i0 | 100 | 272.003154574133 | 317 | 0 | 100 | 0 | 1 | 317 | 56697 | 57013 | Cutibacterium acnes strain KCOM 1315 chromosome, complete genome | blastn | 86225 | 586 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 10134404 | 10134404 | PRJNA764222_S_NODE_4728_length_314_cov_1.955056_g4570_i0 | PRJNA764222 | 4728 | 314 | 1.955056 | 6.13887584 | Cutibacterium | 1912216 | Bacteria | Bacteria | 575 | 1.4099999999999994e-159 | NTclustered | gi|1446500593|gb|CP031442.1| | 1747 | g4570 | i0 | 99.683 | 269.070063694268 | 315 | 0 | 100 | 1 | 1 | 314 | 56233 | 56547 | Cutibacterium acnes strain KCOM 1315 chromosome, complete genome | blastn | 84488 | 575 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 11409574 | 11409574 | PRJNA764222_S_NODE_18569_length_216_cov_1.538462_g18411_i0 | PRJNA764222 | 18569 | 216 | 1.538462 | 3.32307792 | Streptomyces | 1883 | Bacteria | Bacteria | 54.7 | 0.005 | NTclustered | gi|2656536241|gb|CP109419.1| | 2903888 | g18411 | i0 | 92.308 | 0.361111111111111 | 39 | 1 | 17 | 2 | 113 | 149 | 679940 | 679902 | Streptomyces sp. NBC_01508 chromosome, complete genome | blastn | 78 | 54.7 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Kitasatosporales | Streptomycetaceae | Streptomyces | Streptomyces sp. NBC_01508 | ||
| 12224243 | 12224243 | PRJNA764222_S_NODE_13890_length_239_cov_2.208333_g13732_i0 | PRJNA764222 | 13890 | 239 | 2.208333 | 5.27791587 | Rothia kristinae | 37923 | Bacteria | Bacteria | 326 | 1.15e-84 | NTclustered | gi|1943322775|gb|CP065738.1| | 37923 | g13732 | i0 | 91.322 | 334.305439330544 | 242 | 16 | 100 | 5 | 1 | 239 | 984256 | 984017 | Rothia kristinae strain FDAARGOS_864 chromosome, complete genome | blastn | 79899 | 326 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Micrococcaceae | Rothia | Rothia kristinae | ||
| 13498450 | 13498450 | PRJNA764222_S_NODE_24471_length_190_cov_2.706294_g24313_i0 | PRJNA764222 | 24471 | 190 | 2.706294 | 5.1419586 | Cutibacterium acnes | 1747 | Bacteria | Bacteria | 302 | 1.47e-77 | NTclustered | gi|2415255273|gb|CP114143.1| | 1734925 | g24313 | i0 | 100 | 38.6052631578947 | 163 | 0 | 86 | 0 | 1 | 163 | 436264 | 436426 | Cutibacterium acnes subsp. acnes strain CCSM0331 chromosome, complete genome | blastn | 7335 | 302 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 13959714 | 13959714 | PRJNA764222_S_NODE_1431_length_491_cov_5.396396_g1278_i0 | PRJNA764222 | 1431 | 491 | 5.396396 | 26.49630436 | Cutibacterium | 1912216 | Bacteria | Bacteria | 907 | 0 | NTclustered | gi|1755605466|dbj|AP019664.1| | 1747 | g1278 | i0 | 100 | 272.979633401222 | 491 | 0 | 100 | 0 | 1 | 491 | 775254 | 775744 | Cutibacterium acnes TP-CU389 DNA, complete genome | blastn | 134033 | 907 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 13959770 | 13959770 | PRJNA764222_S_NODE_24351_length_191_cov_1.465278_g24193_i0 | PRJNA764222 | 24351 | 191 | 1.465278 | 2.79868098 | Micrococcus | 1269 | Bacteria | Bacteria | 348 | 1.87e-91 | NTclustered | gi|1891023613|gb|CP058971.1| | 1270 | g24193 | i0 | 99.476 | 297.083769633508 | 191 | 1 | 100 | 0 | 1 | 191 | 346911 | 346721 | Micrococcus luteus strain V017 chromosome, complete genome | blastn | 56743 | 348 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Micrococcaceae | Micrococcus | Micrococcus luteus | ||
| 17322969 | 17322969 | PRJNA764222_S_NODE_20314_length_208_cov_1.503106_g20156_i0 | PRJNA764222 | 20314 | 208 | 1.503106 | 3.12646048 | uncultured Actinomycetota bacterium | 3039803 | Bacteria | Bacteria | 161 | 2.8999999999999997e-35 | NTclustered | gi|2874253834|emb|OY969884.1| | 3039803 | g20156 | i0 | 81.592 | 4.61057692307692 | 201 | 31 | 95 | 6 | 3 | 200 | 33434 | 33631 | MAG: uncultured Actinomycetota bacterium isolate MFD01275.bin.c.2 genome assembly, chromosome: 1 | blastn | 959 | 161 | 1 | Bacteria | Bacillati | Actinomycetota | uncultured Actinomycetota bacterium | ||||||
| 20332148 | 20332148 | PRJNA764222_S_NODE_16376_length_226_cov_2.513966_g16218_i0 | PRJNA764222 | 16376 | 226 | 2.513966 | 5.68156316 | Cutibacterium | 1912216 | Bacteria | Bacteria | 357 | 3.81e-94 | NTclustered | gi|1059945062|gb|CP016954.1| | 33010 | g16218 | i0 | 95.175 | 287.849557522124 | 228 | 7 | 100 | 3 | 1 | 226 | 22481 | 22256 | Cutibacterium avidum strain DPC 6544, complete genome | blastn | 65054 | 357 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium avidum | ||
| 21147327 | 21147327 | PRJNA764222_S_NODE_31597_length_164_cov_3.700855_g31439_i0 | PRJNA764222 | 31597 | 164 | 3.700855 | 6.0694022 | Kocuria palustris | 71999 | Bacteria | Bacteria | 252 | 1.26e-62 | NTclustered | gi|923033569|gb|CP012507.1| | 71999 | g31439 | i0 | 95.031 | 274.841463414634 | 161 | 7 | 98 | 1 | 1 | 160 | 501399 | 501559 | Kocuria palustris strain MU14/1, complete genome | blastn | 45074 | 252 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Micrococcaceae | Kocuria | Kocuria palustris | ||
| 24157457 | 24157457 | PRJNA764222_S_NODE_2719_length_366_cov_4.670846_g2561_i0 | PRJNA764222 | 2719 | 366 | 4.670846 | 17.09529636 | Corynebacterium | 1716 | Bacteria | Bacteria | 632 | 9.759999999999998e-177 | NTclustered | gi|2869797333|gb|CP175765.1| | 38304 | g2561 | i0 | 97.814 | 369.136612021858 | 366 | 8 | 100 | 0 | 1 | 366 | 2560 | 2925 | Corynebacterium tuberculostearicum strain YSMAA5_1_F11 chromosome, complete genome | blastn | 135104 | 638 | 0.990595611285266 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Corynebacteriaceae | Corynebacterium | Corynebacterium tuberculostearicum | ||
| 24157476 | 24157476 | PRJNA764222_S_NODE_30419_length_168_cov_1.652893_g30261_i0 | PRJNA764222 | 30419 | 168 | 1.652893 | 2.77686024 | Corynebacterium | 1716 | Bacteria | Bacteria | 300 | 4.56e-77 | NTclustered | gi|2531251647|gb|CP046606.1| | 144183 | g30261 | i0 | 98.817 | 373.666666666667 | 169 | 1 | 100 | 1 | 1 | 168 | 1150374 | 1150206 | Corynebacterium afermentans subsp. afermentans strain DSM 44280 chromosome, complete genome | blastn | 62776 | 300 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Corynebacteriaceae | Corynebacterium | Corynebacterium afermentans | ||
| 25432405 | 25432405 | PRJNA764222_S_NODE_2160_length_401_cov_1.985876_g2002_i0 | PRJNA764222 | 2160 | 401 | 1.985876 | 7.96336276 | Corynebacterium | 1716 | Bacteria | Bacteria | 654 | 0 | NTclustered | gi|2869840509|gb|CP175798.1| | 38304 | g2002 | i0 | 96.259 | 393.69825436409 | 401 | 11 | 99 | 4 | 3 | 401 | 2217968 | 2217570 | Corynebacterium tuberculostearicum strain YSMAA1_1_C1 chromosome, complete genome | blastn | 157873 | 654 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Corynebacteriaceae | Corynebacterium | Corynebacterium tuberculostearicum |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;