RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA764222" and tax_kingdom = "Shotokuvirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Shotokuvirae · 3 ✖

bioproject 1

  • PRJNA764222 · 3 ✖

analysis 1

  • blastn · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1205783 1205783 PRJNA764222_S_NODE_6981_length_287_cov_7.887500_g6823_i0 PRJNA764222 6981 287 7.8875 22.637125 Copiparvovirus 1511888 Viruses Viruses 520 6.049999999999999e-143   NTclustered gi|1725344901|ref|NC_031959.2| 1917013 g6823 i0 99.303 4.56445993031359 287 2 100 0 1 287 5306 5020 Bosavirus MS-2016a, complete genome blastn 1310 520 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae Copiparvovirus Copiparvovirus ungulate5
22421933 22421933 PRJNA764222_S_NODE_20718_length_206_cov_1.660377_g20560_i0 PRJNA764222 20718 206 1.660377 3.42037662 Erythroparvovirus ungulate1 3052194 Viruses Viruses 381 2.0199999999999994e-101   NTclustered gi|2500352099|ref|NC_074970.1| 172297 g20560 i0 100 8.97087378640777 206 0 100 0 1 206 3319 3524 Bovine parvovirus 3 putative non-structural protein and putative capsid protein genes, complete cds blastn 1848 381 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae Erythroparvovirus Erythroparvovirus ungulate1
24971169 24971169 PRJNA764222_S_NODE_13500_length_241_cov_2.427835_g13342_i0 PRJNA764222 13500 241 2.427835 5.85108235 Erythroparvovirus ungulate1 3052194 Viruses Viruses 440 3.959999999999999e-119   NTclustered gi|2500352099|ref|NC_074970.1| 172297 g13342 i0 99.585 9.00829875518672 241 1 100 0 1 241 1963 2203 Bovine parvovirus 3 putative non-structural protein and putative capsid protein genes, complete cds blastn 2171 440 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae Erythroparvovirus Erythroparvovirus ungulate1

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;