RNAquarium Metadata Server
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contig_metadata

9 rows where analysis = "blastn", bioproject = "PRJNA763718" and tax_phylum = "Rotifera"

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tax_superkingdom 1

tax_phylum 1

  • Rotifera · 9 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA763718 · 9 ✖

analysis 1

  • blastn · 9 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2020225 2020225 PRJNA763718_S_NODE_6542_length_171_cov_1.626866_g6334_i0 PRJNA763718 6542 171 1.626866 2.78194086 Adineta ricciae 249248 Rotifera other_Eukaryota 152 1.37e-32   NTclustered gi|403492568|gb|JX193023.1| 249248 g6334 i0 88.189 3.22222222222222 127 15 74 0 45 171 1027 901 Adineta ricciae isolate AU.1.2 alpha tubulin gene, partial cds blastn 551 152 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta ricciae
7583455 7583455 PRJNA763718_S_NODE_8366_length_153_cov_1.965517_g8158_i0 PRJNA763718 8366 153 1.965517 3.00724101 Ploima 84394 Rotifera other_Eukaryota 272 8.84e-69   NTclustered gi|1957252648|gb|MW484998.1| 1213212 g8158 i0 98.693 100.104575163399 153 2 100 0 1 153 1411 1563 Lecane monostyla voucher NNIBRIV50294 small subunit ribosomal RNA gene, partial sequence blastn 15316 272 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Lecanidae Lecane Lecane monostyla
13497968 13497968 PRJNA763718_S_NODE_8251_length_154_cov_1.649573_g8043_i0 PRJNA763718 8251 154 1.649573 2.54034242 Brachionus calyciflorus 104777 Rotifera other_Eukaryota 150 4.359999999999999e-32   NTclustered gi|2105975276|gb|MZ706949.1| 104777 g8043 i0 89.744 73.5714285714286 117 12 76 0 37 153 26798 26682 Brachionus calyciflorus chromosome I mitochondrion, complete sequence blastn 11330 150 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus calyciflorus
14773140 14773140 PRJNA763718_S_NODE_7152_length_164_cov_1.519685_g6944_i0 PRJNA763718 7152 164 1.519685 2.4922834 Habrotrocha constricta 104786 Rotifera other_Eukaryota 152 1.31e-32   NTclustered gi|402761789|gb|JX184026.1| 104786 g6944 i0 83.832 1.01829268292683 167 19 99 6 2 164 895 1057 Habrotrocha constricta cytochrome b (CYTB) gene, complete cds; mitochondrial blastn 167 152 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Habrotrochidae Habrotrocha Habrotrocha constricta
16046799 16046799 PRJNA763718_S_NODE_2533_length_285_cov_9.814516_g2325_i0 PRJNA763718 2533 285 9.814516 27.9713706 Brachionus angularis 396692 Rotifera other_Eukaryota 183 8.949999999999997e-42   NTclustered gi|213959396|gb|FJ426630.1| 396692 g2325 i0 79.554 9.44912280701754 269 45 93 10 12 277 380 119 Brachionus angularis voucher S. H. Cheng 001 16S ribosomal RNA gene, partial sequence; mitochondrial blastn 2693 183 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus angularis
16046816 16046816 PRJNA763718_S_NODE_5173_length_192_cov_10.832258_g4965_i0 PRJNA763718 5173 192 10.832258 20.79793536 Philodina citrina 468664 Rotifera other_Eukaryota 281 1.9400000000000002e-71   NTclustered gi|407227484|emb|FR856884.1| 468664 g4965 i0 93.264 50.6927083333333 193 10 99 3 1 191 1907 2098 Philodina citrina complete mitochondrial genome blastn 9733 281 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina citrina
18595845 18595845 PRJNA763718_S_NODE_6055_length_177_cov_11.400000_g5847_i0 PRJNA763718 6055 177 11.4 20.178 Philodina citrina 468664 Rotifera other_Eukaryota 255 1.06e-63   NTclustered gi|407227484|emb|FR856884.1| 468664 g5847 i0 96.154 4.24293785310734 156 6 88 0 22 177 2399 2244 Philodina citrina complete mitochondrial genome blastn 751 255 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina citrina
21146734 21146734 PRJNA763718_S_NODE_6877_length_167_cov_1.784615_g6669_i0 PRJNA763718 6877 167 1.784615 2.98030705 Lecane hamata 1213208 Rotifera other_Eukaryota 191 2.85e-44   NTclustered gi|1199302039|gb|KY749534.1| 1213208 g6669 i0 87.349 99.0958083832335 166 21 99 0 1 166 594 429 Lecane hamata isolate TIN60DE cytochrome oxidase subunit I (COI) gene, partial cds; mitochondrial blastn 16549 191 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Lecanidae Lecane Lecane hamata
23697132 23697132 PRJNA763718_S_NODE_3699_length_230_cov_1.984456_g3491_i0 PRJNA763718 3699 230 1.984456 4.5642488 Macrotrachela quadricornifera 104788 Rotifera other_Eukaryota 309 1.1e-79   NTclustered gi|402761731|gb|JX183997.1| 104788 g3491 i0 90.87 98.5913043478261 230 21 100 0 1 230 694 923 Macrotrachela quadricornifera isolate HR cytochrome c oxidase subunit 1 (COX1) gene, partial cds; mitochondrial blastn 22676 309 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Macrotrachela Macrotrachela quadricornifera

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;